Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 1
- nucleus 3
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX78523 | Canola | nucleus | 84.88 | 84.3 |
| Bra006201.1-P | Field mustard | nucleus | 84.88 | 84.12 |
| CDX70505 | Canola | nucleus | 84.65 | 84.08 |
| Bra023414.1-P | Field mustard | nucleus | 72.91 | 81.77 |
| CDX85648 | Canola | nucleus | 72.69 | 81.52 |
| CDX91120 | Canola | nucleus | 63.88 | 75.47 |
| KRH23930 | Soybean | nucleus | 47.18 | 45.43 |
| KRH39865 | Soybean | nucleus | 48.08 | 45.42 |
| VIT_13s0019g01830.t01 | Wine grape | mitochondrion, nucleus | 45.82 | 43.28 |
| KRH29958 | Soybean | cytosol, mitochondrion | 44.02 | 42.67 |
| KRH63082 | Soybean | cytosol | 42.89 | 42.22 |
| Solyc01g088250.2.1 | Tomato | cytosol, plastid | 41.31 | 39.96 |
| PGSC0003DMT400017589 | Potato | cytosol, plastid | 37.02 | 38.14 |
| AT3G51380.1 | Thale cress | mitochondrion | 8.58 | 36.89 |
| AT5G03960.2 | Thale cress | cytosol, mitochondrion | 23.48 | 25.74 |
| GSMUA_Achr3P17450_001 | Banana | nucleus | 23.25 | 22.94 |
| TraesCS5A01G163000.1 | Wheat | nucleus | 24.61 | 22.9 |
| TraesCS5D01G168000.2 | Wheat | nucleus | 24.38 | 22.5 |
| TraesCS5B01G160400.1 | Wheat | cytosol | 24.15 | 22.48 |
| AT1G51960.1 | Thale cress | cytosol, mitochondrion | 16.93 | 21.37 |
| Os03t0355700-00 | Rice | cytosol | 21.67 | 21.29 |
| EER94844 | Sorghum | cytosol | 23.7 | 21.04 |
| AT3G16490.1 | Thale cress | cytosol | 18.06 | 20.57 |
| Zm00001d029197_P001 | Maize | nucleus | 21.9 | 20.38 |
| AT4G29150.1 | Thale cress | mitochondrion | 17.38 | 19.3 |
| HORVU5Hr1G050840.5 | Barley | cytosol, plastid | 22.8 | 18.17 |
| AT5G62070.1 | Thale cress | cytosol, plastid | 16.03 | 17.62 |
| AT4G14750.3 | Thale cress | cytosol | 18.06 | 17.39 |
| AT5G07240.2 | Thale cress | plastid | 16.25 | 16.11 |
| AT1G74690.1 | Thale cress | cytosol | 20.09 | 15.16 |
| AT1G18840.1 | Thale cress | cytosol | 18.74 | 14.51 |
| AT4G23060.1 | Thale cress | mitochondrion, nucleus | 15.12 | 13.84 |
| AT2G02790.1 | Thale cress | cytosol | 18.06 | 12.58 |
| AT1G14380.1 | Thale cress | cytosol | 18.06 | 12.05 |
| AT1G19870.1 | Thale cress | nucleus | 16.48 | 9.19 |
Protein Annotations
| Gene3D:1.20.5.190 | MapMan:35.1 | EntrezGene:831188 | UniProt:A0A178UP10 | ProteinID:AED91897.1 | ArrayExpress:AT5G13460 |
| EnsemblPlantsGene:AT5G13460 | RefSeq:AT5G13460 | TAIR:AT5G13460 | RefSeq:AT5G13460-TAIR-G | EnsemblPlants:AT5G13460.1 | TAIR:AT5G13460.1 |
| EMBL:AY054652 | EMBL:AY086149 | EMBL:AY128736 | Unigene:At.26451 | ProteinID:CAB87153.1 | InterPro:DUF4005 |
| GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005623 | GO:GO:0005886 |
| GO:GO:0008150 | GO:GO:0016020 | InterPro:IPR000048 | Symbol:IQD11 | InterPro:IQ_motif_EF-hand-BS | RefSeq:NP_196850.1 |
| ProteinID:OAO95220.1 | PFAM:PF00612 | PFAM:PF13178 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 |
| PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 |
| PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 |
| PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 |
| PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 |
| PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 |
| PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 | PFscan:PS50096 | PANTHER:PTHR32295 | PANTHER:PTHR32295:SF35 |
| UniProt:Q9LYR0 | SMART:SM00015 | UniParc:UPI000009D7D1 | SEG:seg | : | : |
Description
IQD11IQ-domain 11 [Source:UniProtKB/TrEMBL;Acc:Q9LYR0]
Coordinates
chr5:+:4315759..4318414
Molecular Weight (calculated)
50823.4 Da
IEP (calculated)
10.611
GRAVY (calculated)
-0.907
Length
443 amino acids
Sequence
(BLAST)
(BLAST)
001: MAKKKGLFTV LKRIFISEVN SEKKEKRRKW TFWKLRIKKR LPSITAPPEH RTSHESHEEQ KEEIVSDVGE ISQVSCSRQL DSIEESKGST SPETADLVVQ
101: YQMFLNRQEE VLAATRIQTA FRGHLARKAL RALKGIVKLQ AYIRGRAVRR QAMTTLKCLQ SVVNIQSQVC GKRTQIPGGV HRDYEESNIF NDNILKVDTN
201: GQKRWDDSLL TKEEKEAVVM SKKEASLRRE RIKEYAVTHR KSAESYQKRS NTKWKYWLDE WVDTQLTKSK ELEDLDFSSK TKPKDETLNE KQLKTPRNSS
301: PRRLVNNHRR QVSIGEDEQS PAAVTITTPT YMVATESAKA KSRSLSSPRI RPRSFDTQSE SYSPYKNKLC LTTSMMSEAP SKVRIANNGS NTRPSAYQQR
401: SPGLRGFNIG PLKSCNNNNT LLNDLSINSE RSLPSWNKQS SLR
101: YQMFLNRQEE VLAATRIQTA FRGHLARKAL RALKGIVKLQ AYIRGRAVRR QAMTTLKCLQ SVVNIQSQVC GKRTQIPGGV HRDYEESNIF NDNILKVDTN
201: GQKRWDDSLL TKEEKEAVVM SKKEASLRRE RIKEYAVTHR KSAESYQKRS NTKWKYWLDE WVDTQLTKSK ELEDLDFSSK TKPKDETLNE KQLKTPRNSS
301: PRRLVNNHRR QVSIGEDEQS PAAVTITTPT YMVATESAKA KSRSLSSPRI RPRSFDTQSE SYSPYKNKLC LTTSMMSEAP SKVRIANNGS NTRPSAYQQR
401: SPGLRGFNIG PLKSCNNNNT LLNDLSINSE RSLPSWNKQS SLR
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.