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Thale cress
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 3
  • cytosol 1
  • plastid 2
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY29389 Canola nucleus, plastid 72.54 77.01
CDY44186 Canola nucleus, plastid 70.65 76.74
CDX83739 Canola nucleus 71.16 76.45
Bra025777.1-P Field mustard nucleus, plastid 71.54 76.34
Bra016490.1-P Field mustard nucleus 70.91 76.18
CDY62588 Canola nucleus 70.03 75.03
VIT_18s0001g13870.t01 Wine grape nucleus 37.41 37.5
GSMUA_Achr1P19900_001 Banana cytosol 10.33 35.19
AT3G51380.1 Thale cress mitochondrion 4.41 33.98
PGSC0003DMT400009545 Potato nucleus 36.27 33.18
Solyc04g081210.2.1 Tomato nucleus 35.89 33.06
KRH51729 Soybean cytosol 34.51 32.27
GSMUA_Achr1P06080_001 Banana nucleus 28.21 28.75
GSMUA_Achr3P11240_001 Banana nucleus 27.08 27.53
KRH61064 Soybean nucleus 24.31 26.55
GSMUA_Achr7P06540_001 Banana endoplasmic reticulum, plasma membrane 27.46 25.77
GSMUA_Achr1P19910_001 Banana nucleus 19.02 25.25
TraesCS2A01G492300.1 Wheat nucleus 26.45 24.39
TraesCS2B01G520500.3 Wheat nucleus 26.2 24.27
TraesCS2D01G492600.1 Wheat nucleus 26.2 24.16
Os04t0663100-01 Rice plasma membrane 27.08 24.08
EES11606 Sorghum nucleus 26.2 23.48
Zm00001d026535_P003 Maize nucleus 25.82 22.75
Zm00001d001953_P003 Maize nucleus 25.57 22.14
AT1G74690.1 Thale cress cytosol 15.49 20.95
AT1G51960.1 Thale cress cytosol, mitochondrion 8.44 19.09
AT4G29150.1 Thale cress mitochondrion 9.57 19.05
AT1G18840.1 Thale cress cytosol 13.6 18.88
AT5G62070.1 Thale cress cytosol, plastid 9.57 18.86
AT3G16490.1 Thale cress cytosol 8.69 17.74
AT4G14750.3 Thale cress cytosol 9.95 17.17
AT5G07240.2 Thale cress plastid 9.32 16.55
AT5G13460.1 Thale cress nucleus 9.19 16.48
AT1G14380.1 Thale cress cytosol 13.35 15.96
AT2G02790.1 Thale cress cytosol 12.34 15.41
AT4G23060.1 Thale cress mitochondrion, nucleus 8.82 14.46
AT5G03960.2 Thale cress cytosol, mitochondrion 7.18 14.11
HORVU2Hr1G124440.1 Barley cytosol 0.76 9.84
Protein Annotations
Gene3D:1.20.5.190MapMan:35.1EntrezGene:838575UniProt:A0A178WED9ProteinID:AAG12559.1ProteinID:AEE29908.1
EMBL:AK220728ArrayExpress:AT1G19870EnsemblPlantsGene:AT1G19870RefSeq:AT1G19870TAIR:AT1G19870RefSeq:AT1G19870-TAIR-G
EnsemblPlants:AT1G19870.1TAIR:AT1G19870.1EMBL:AY084918EMBL:AY102110Unigene:At.16210EMBL:BT001081
InterPro:DUF4005GO:GO:0003674GO:GO:0005488GO:GO:0005515GO:GO:0005575GO:GO:0005622
GO:GO:0005623GO:GO:0005634GO:GO:0005737GO:GO:0005829GO:GO:0005856GO:GO:0005875
GO:GO:0005886GO:GO:0008150GO:GO:0009536GO:GO:0009719GO:GO:0009737GO:GO:0009941
GO:GO:0016020InterPro:IPR000048InterPro:IQ_motif_EF-hand-BSRefSeq:NP_564097.1ProteinID:OAP16748.1PFAM:PF00612
PFAM:PF13178PO:PO:0000005PO:PO:0000013PO:PO:0000037PO:PO:0000230PO:PO:0000293
PO:PO:0001054PO:PO:0001078PO:PO:0001081PO:PO:0001185PO:PO:0004507PO:PO:0007064
PO:PO:0007095PO:PO:0007098PO:PO:0007103PO:PO:0007115PO:PO:0007123PO:PO:0007611
PO:PO:0007616PO:PO:0008019PO:PO:0009005PO:PO:0009006PO:PO:0009009PO:PO:0009010
PO:PO:0009025PO:PO:0009029PO:PO:0009030PO:PO:0009031PO:PO:0009032PO:PO:0009046
PO:PO:0009047PO:PO:0009052PO:PO:0020030PO:PO:0020038PO:PO:0020100PO:PO:0020137
PO:PO:0025022PO:PO:0025281PFscan:PS50096PANTHER:PTHR32295PANTHER:PTHR32295:SF16UniProt:Q9FXI5
SMART:SM00015UniParc:UPI0000162E21Symbol:iqd32SEG:seg::
Description
IQD32Protein IQ-DOMAIN 32 [Source:UniProtKB/Swiss-Prot;Acc:Q9FXI5]
Coordinates
chr1:-:6895009..6898818
Molecular Weight (calculated)
86886.5 Da
IEP (calculated)
4.943
GRAVY (calculated)
-0.897
Length
794 amino acids
Sequence
(BLAST)
001: MGRSPASSCL RLISCSGGDD TSADPNSTAL ENKSSGDKRG WSFRKKSGKQ RGLITSVVSE TTPASRTRET LESALLKSPS PDNNNVSEKQ QQSFSVDEKK
101: SQLPVVTYVA EPVDEKKTQS VIEEKTELLS VEEQIDHRTE VSPVIVESKG TETEEDDLIG TELQGPSAAD AAKIEEDVTS EVEMASKVEP EESESDDVII
201: VRKESDEKVD EKLDESVIVV IQAAVRGFLA RRELLRSKKV IKLQAAVRGH LVRSQAMGSL RCVQAIVKMQ AMVRARHSTK DGSRVSATSD KSEPNAAAQK
301: LLENKFAKHL MESTPKTKPI NIKCDPTKPS SAWNWLERWM SVPKPEKTSK ANLTTEEQNL EETQNVKISP QADFVNSDST VENKTETDMP SYEASKVEGQ
401: NVELSETEKM SQYDSPEASA EVYYDSIQSQ PLAAKPDSLL EEPEYVDGQI KHSLKRKVSN PSFIAAQSKF EELTSSTGSN KAMTLSSKDD VLGEEGKTDI
501: DSPDTTNTIK DHSLEDVTPA ELSGSECGTE LSVTSSLDTL EKKSDAEGAE PRVEAKLLED DTFKTDQAEL IEIDVKDATS MGTVEDPKEK VENAKDEVEI
601: SATHHEPVIS TPDSKKRRAE DESGPQAYAL SEGALTPMTI TESQATPASQ ASSSVKARKG KSEKSGSSQK RKVSKKITSS PKQEIGTGEA TEQEEGKEQK
701: SGRRTSFGYD QEARESSGGK NSLPRFMQPT QSAKAKVQEH NSPRSSPDLQ ERDVVSAKKR HSLPGVTNGK QVSPRIQRSA SQAQQGTKDR KWQR
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.