Factsheet for GSMUA_Achr1P19900_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plasma membrane
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr1P02670_001	Banana	mitochondrion	15.45	25.17
GSMUA_Achr4P21190_001	Banana	cytosol	17.17	19.9
GSMUA_Achr11P...	Banana	mitochondrion	15.02	17.59
GSMUA_Achr1P06080_001	Banana	nucleus	58.37	17.46
GSMUA_Achr3P11240_001	Banana	nucleus	57.51	17.16
GSMUA_Achr7P06540_001	Banana	endoplasmic reticulum, plasma membrane	61.37	16.9
GSMUA_Achr4P30750_001	Banana	mitochondrion	18.03	15.67
GSMUA_Achr8P27610_001	Banana	cytosol, mitochondrion	20.6	14.16
GSMUA_Achr8P11920_001	Banana	cytosol	21.03	13.65
GSMUA_AchrUn_...	Banana	cytosol	21.89	13.46
GSMUA_Achr6P14870_001	Banana	cytosol, mitochondrion	21.46	13.33
GSMUA_Achr10P...	Banana	cytosol, mitochondrion	20.6	13.01
GSMUA_Achr7P13670_001	Banana	cytosol, mitochondrion	21.03	13.0
GSMUA_Achr5P13660_001	Banana	cytosol, mitochondrion	24.03	12.79
GSMUA_Achr8P20170_001	Banana	cytosol, mitochondrion	21.89	12.75
GSMUA_Achr3P14930_001	Banana	cytosol	20.6	12.66
GSMUA_Achr3P17570_001	Banana	cytosol, mitochondrion	21.89	12.62
GSMUA_Achr6P26400_001	Banana	cytosol, mitochondrion	21.46	12.59
GSMUA_Achr9P06040_001	Banana	cytosol	20.6	12.5
GSMUA_Achr10P...	Banana	cytosol	23.61	12.47
GSMUA_Achr8P26800_001	Banana	cytosol	19.74	12.3
VIT_18s0001g13870.t01	Wine grape	nucleus	41.63	12.25
GSMUA_Achr3P18210_001	Banana	cytosol, mitochondrion	22.32	12.12
GSMUA_Achr5P06520_001	Banana	cytosol, mitochondrion	21.03	12.07
GSMUA_Achr5P20090_001	Banana	cytosol, mitochondrion	22.32	11.33
KRH51729	Soybean	cytosol	40.77	11.19
GSMUA_Achr11P...	Banana	cytosol, mitochondrion	19.74	10.87
PGSC0003DMT400009545	Potato	nucleus	39.48	10.6
Solyc04g081210.2.1	Tomato	nucleus	38.63	10.44
AT1G19870.1	Thale cress	nucleus	35.19	10.33
Bra016490.1-P	Field mustard	nucleus	32.62	10.28
Bra025777.1-P	Field mustard	nucleus, plastid	32.19	10.08
GSMUA_Achr3P17450_001	Banana	nucleus	18.45	9.58
TraesCS2B01G520500.3	Wheat	nucleus	33.48	9.1
TraesCS2D01G492600.1	Wheat	nucleus	33.48	9.06
TraesCS2A01G492300.1	Wheat	nucleus	33.48	9.06
Os04t0663100-01	Rice	plasma membrane	33.05	8.62
EES11606	Sorghum	nucleus	30.9	8.13
GSMUA_Achr4P30780_001	Banana	cytosol, mitochondrion	19.31	8.12
GSMUA_AchrUn_...	Banana	mitochondrion	17.6	8.1
Zm00001d001953_P003	Maize	nucleus	31.76	8.07
Zm00001d026535_P003	Maize	nucleus	30.9	7.99
GSMUA_Achr8P26180_001	Banana	mitochondrion	16.31	7.24
GSMUA_Achr2P15790_001	Banana	cytosol	17.6	7.16
GSMUA_Achr8P19690_001	Banana	mitochondrion	6.01	5.09
HORVU2Hr1G124440.1	Barley	cytosol	1.29	4.92
GSMUA_Achr1P19910_001	Banana	nucleus	6.87	2.68
KRH61064	Soybean	nucleus	5.58	1.79
CDX75112	Canola	cytosol	0.0	0.0
GSMUA_Achr2P00850_001	Banana	nucleus, plastid	0.0	0.0

Protein Annotations

Gene3D:1.20.5.190	MapMan:35.2	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575
GO:GO:0016020	GO:GO:0016021	EnsemblPlantsGene:GSMUA_Achr1G19900_001	EnsemblPlants:GSMUA_Achr1P19900_001	EnsemblPlants:GSMUA_Achr1T19900_001	InterPro:IPR000048
InterPro:IQ_motif_EF-hand-BS	UniProt:M0S1E8	InterPro:P-loop_NTPase	PFAM:PF00612	PFscan:PS50096	PANTHER:PTHR32295
PANTHER:PTHR32295:SF16	SMART:SM00015	SUPFAM:SSF52540	TMHMM:TMhelix	UniParc:UPI000295792E	SEG:seg

Description

Putative Protein IQ-DOMAIN 32 [Source:GMGC_GENE;Acc:GSMUA_Achr1G19900_001]

Coordinates

chr1:+:14932344..14935500

Molecular Weight (calculated)

25517.4 Da

IEP (calculated)

8.493

GRAVY (calculated)

0.205

Length

233 amino acids

Sequence
(BLAST)

001: MGKPASSCFK IIGCGSSSDA VDNDDLAPEE AKASADKRMW SFRKRLSKHQ VLCNNVISEP LSVCSSKENQ DVSAANFHSP NFSFPERTQE QEKSIGISPV
101: PTEIVNTESP VSKSCTTPVG PTLNESDALV IQAAIRGYMA KKKLHKLKSV VKLQAAVRGH LVRSQAIGTL RCIQAIIRMQ AFVRAHHARQ LCLIIMISMV
201: SDGIVAVYIY VCVCICICIC ICICICIYVH VYI

Best Arabidopsis Sequence Match ( AT1G19870.2 )
(BLAST)

001: MASKVEPEES ESDDVIIVRK ESDEKVDEKL DESVIVVIQA AVRGFLARRE LLRSKKVIKL QAAVRGHLVR SQAMGSLRCV QAIVKMQAMV RARHSTKDGS
101: RVSATSDKSE PNAAAQKLLE NKFAKHLMES TPKTKPINIK CDPTKPSSAW NWLERWMSVP KPEKTSKANL TTEEQNLEET QNVKISPQAD FVNSDSTVEN
201: KTETDMPSYE ASKVEGQNVE LSETEKMSQY DSPEASAEVY YDSIQSQPLA AKPDSLLEEP EYVDGQIKHS LKRKVSNPSF IAAQSKFEEL TSSTGSNKAM
301: TLSSKDDVLG EEGKTDIDSP DTTNTIKDHS LEDVTPAELS GSECGTELSV TSSLDTLEKK SDAEGAEPRV EAKLLEDDTF KTDQAELIEI DVKDATSMGT
401: VEDPKEKVEN AKDEVEISAT HHEPVISTPD SKKRRAEDES GPQAYALSEG ALTPMTITES QATPASQASS SVKARKGKSE KSGSSQKRKV SKKITSSPKQ
501: EIGTGEATEQ EEGKEQKSGR RTSFGYDQEA RESSGGKNSL PRFMQPTQSA KAKVQEHNSP RSSPDLQERD VVSAKKRHSL PGVTNGKQVS PRIQRSASQA
601: QQGTKDRKWQ R

Arabidopsis Description

IQD32Protein IQ-DOMAIN 32 [Source:UniProtKB/Swiss-Prot;Acc:Q9FXI5]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.