CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
cytosol 2
mitochondrion 2
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX98787	Canola	mitochondrion	43.17	20.27
CDX98786	Canola	nucleus	44.6	13.05
CDY41368	Canola	mitochondrion, plastid	38.85	12.86
CDX76341	Canola	mitochondrion, plastid	37.41	12.38
CDY41252	Canola	cytosol, mitochondrion	42.45	12.09
CDY53133	Canola	nucleus	41.73	11.93
CDX94150	Canola	nucleus	38.13	11.42
CDY50677	Canola	nucleus	12.23	4.62
CDY36861	Canola	nucleus	12.23	4.55
CDY00253	Canola	plastid	12.23	4.31
CDX86928	Canola	mitochondrion, plastid	11.51	4.06
CDY64325	Canola	cytosol	10.79	4.02
CDX70019	Canola	cytosol, mitochondrion	10.07	3.95
CDX98994	Canola	mitochondrion	10.07	3.95
CDY00251	Canola	plastid	11.51	3.89
CDX78285	Canola	plastid	9.35	3.78
CDX82400	Canola	cytosol	10.07	3.75
CDX75883	Canola	cytosol	10.07	3.73
CDX81042	Canola	plastid	9.35	3.36
CDY30233	Canola	mitochondrion	9.35	3.35
CDY47784	Canola	mitochondrion	9.35	3.35
CDY43103	Canola	cytosol	8.63	3.26
CDX92076	Canola	cytosol	8.63	3.1
CDY67178	Canola	cytosol, mitochondrion	8.63	3.09
CDY68636	Canola	cytosol	8.63	3.08
CDY41423	Canola	cytosol, mitochondrion	4.32	2.05
CDX70272	Canola	cytosol, mitochondrion	4.32	2.05
CDX70505	Canola	nucleus	6.47	2.02
CDX78523	Canola	nucleus	6.47	2.02
CDY41417	Canola	mitochondrion	4.32	2.01
CDY29016	Canola	mitochondrion	1.44	1.94
CDX90650	Canola	mitochondrion	1.44	1.94
CDY41676	Canola	cytosol, plastid	7.91	1.91
CDY45197	Canola	nucleus, plastid	7.91	1.89
CDX91120	Canola	nucleus	5.04	1.87
CDX85648	Canola	nucleus	5.04	1.77
CDY17427	Canola	cytosol, plastid	7.19	1.76
CDY67405	Canola	cytosol	7.19	1.73
GSMUA_Achr3P11240_001	Banana	nucleus	9.35	1.66
GSMUA_Achr7P06540_001	Banana	endoplasmic reticulum, plasma membrane	10.07	1.65
CDY19251	Canola	cytosol, mitochondrion	6.47	1.61
CDY04137	Canola	cytosol, plastid	6.47	1.6
CDY03037	Canola	cytosol	6.47	1.56
CDX73724	Canola	mitochondrion	1.44	1.54
CDY45643	Canola	cytosol	3.6	1.53
CDY04907	Canola	endoplasmic reticulum	3.6	1.49
CDY14162	Canola	endoplasmic reticulum	3.6	1.49
CDX83739	Canola	nucleus	7.91	1.49
CDY62588	Canola	nucleus	7.91	1.48
Os04t0663100-01	Rice	plasma membrane	9.35	1.46
CDY04138	Canola	cytosol, plastid	5.76	1.43
CDY26720	Canola	cytosol, mitochondrion	5.76	1.42
GSMUA_Achr1P06080_001	Banana	nucleus	7.91	1.41
TraesCS2B01G520500.3	Wheat	nucleus	8.63	1.4
TraesCS2D01G492600.1	Wheat	nucleus	8.63	1.39
CDY44186	Canola	nucleus, plastid	7.19	1.37
GSMUA_Achr1P19910_001	Banana	nucleus	5.76	1.34
CDY29389	Canola	nucleus, plastid	7.19	1.34
CDX78003	Canola	mitochondrion	1.44	1.32
TraesCS2A01G492300.1	Wheat	nucleus	7.91	1.28
CDX83805	Canola	cytosol, mitochondrion	5.04	1.25
EES11606	Sorghum	nucleus	7.91	1.24
Zm00001d001953_P003	Maize	nucleus	7.19	1.09
CDX96693	Canola	nucleus	5.04	1.04
CDY72577	Canola	cytosol, mitochondrion	2.16	1.03
Zm00001d026535_P003	Maize	nucleus	6.47	1.0
CDY49085	Canola	cytosol	4.32	0.98
CDY39317	Canola	cytosol	3.6	0.82
CDY53440	Canola	mitochondrion	1.44	0.69
CDY46537	Canola	cytosol, mitochondrion	1.44	0.69
HORVU2Hr1G124440.1	Barley	cytosol	0.0	0.0
GSMUA_Achr1P19900_001	Banana	cytosol	0.0	0.0
CDY29768	Canola	cytosol	0.0	0.0

Protein Annotations

EnsemblPlants:CDX75112

EnsemblPlantsGene:GSBRNA2T00118834001

ProteinID:CDX75112

ProteinID:CDX75112.1

UniParc:UPI0004EEA366

MapMan:35.2

Description

BnaC09g25700D

Coordinates

chrLK031803:+:375841..378296

Molecular Weight (calculated)

16350.4 Da

IEP (calculated)

10.382

GRAVY (calculated)

-0.698

Length

139 amino acids

Sequence
(BLAST)

001: MDRRHKNSYT RRNRLDMFYL SQLVIDNSGR FGPVYTFPFS PSSSHEEAVN QFFTAKNSHQ LHSATSISKG SAFTEIPRNF PTEFRGNKLP RKFRGSLVCQ
101: KCPRNIPREN FVGIFPRTFI DRCEYSEEQF PRYIPNVFL

Best Arabidopsis Sequence Match ( AT4G23060.1 )
(BLAST)

001: MGKASRWFRS LFGVKKPDPG YPDLSVETPS RSTSSNLKRR WSFVKSKREK ESTPINQVPH TPSLPNSTPP PPSHHQSSPR RRRKQKPMWE DEGSEDSDKH
101: AIAVAAATAA VAEAAVAAAN AAAAVVRLTS TSGRSTRSPV KARFSDGFDD VVAHGSKFYG HGRDSCELAV IKIQSIFRGY LAKRALRALK GLVRLQAIVR
201: GHIERKRMSV HLRRMHALVR AQARVRATRV IVTPESSSSQ SNNTKSSHFQ NPGPPTPEKL EHSISSRSSK LAHSHLFKRN GSKASDNNRL YPAHRETFSA
301: TDEEEKILQI DRKHISSYTR RNRPDMFYSS HLILDNAGLS EPVFATPFSP SSSHEEITSQ FCTAENSPQL YSATSRSKRS AFTASSIAPS DCTKSCCDGD
401: HPSYMACTES SRAKARSASA PKSRPQLFYE RPSSKRFGFV DLPYCGDTKS GPQKGSALHT SFMNKAYPGS GRLDRLGMPI GYRY

Arabidopsis Description

IQD22Calmodulin binding protein IQD22 [Source:UniProtKB/TrEMBL;Acc:Q2NNE0]
SUBAcon: [nucleus,mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.