CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid

Predictor Summary:

nucleus 2
plastid 2
mitochondrion 4
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX76341	Canola	mitochondrion, plastid	94.05	94.05
CDY41252	Canola	cytosol, mitochondrion	80.71	69.47
CDY53133	Canola	nucleus	80.0	69.14
CDX94150	Canola	nucleus	75.71	68.53
CDX98787	Canola	mitochondrion	47.86	67.91
CDX98786	Canola	nucleus	75.95	67.16
GSMUA_Achr8P11920_001	Banana	cytosol	34.29	40.11
KRH03972	Soybean	cytosol	42.38	39.82
CDX90650	Canola	mitochondrion	9.76	39.81
Solyc08g007920.1.1	Tomato	cytosol	22.14	39.74
Solyc08g007930.1.1	Tomato	cytosol	21.19	39.21
VIT_02s0025g04120.t01	Wine grape	mitochondrion	45.95	39.07
KRH57246	Soybean	cytosol	41.19	38.88
CDX75112	Canola	cytosol	12.86	38.85
CDY29016	Canola	mitochondrion	9.52	38.84
KRH77498	Soybean	cytosol, mitochondrion	35.48	37.63
Os04t0569900-01	Rice	cytosol, mitochondrion	41.19	37.28
EES12687	Sorghum	cytosol, mitochondrion	41.19	37.05
Zm00001d002630_P002	Maize	mitochondrion	40.0	36.76
GSMUA_Achr5P20090_001	Banana	cytosol, mitochondrion	39.52	36.17
Solyc08g080470.2.1	Tomato	plastid	42.62	35.87
PGSC0003DMT400007855	Potato	cytosol, plastid	42.62	35.8
TraesCS2B01G418900.1	Wheat	cytosol, mitochondrion	39.05	35.65
PGSC0003DMT400014796	Potato	cytosol	30.48	35.56
TraesCS2D01G398300.1	Wheat	cytosol, mitochondrion	38.81	35.28
GSMUA_Achr5P13660_001	Banana	cytosol, mitochondrion	36.67	35.16
GSMUA_Achr3P18210_001	Banana	cytosol, mitochondrion	35.71	34.97
CDX78285	Canola	plastid	28.1	34.3
Zm00001d026084_P001	Maize	mitochondrion	40.48	34.27
CDX98994	Canola	mitochondrion	28.81	34.18
CDX70019	Canola	cytosol, mitochondrion	28.57	33.9
CDY00253	Canola	plastid	30.95	32.99
HORVU0Hr1G005320.2	Barley	cytosol	28.33	32.69
CDX86928	Canola	mitochondrion, plastid	30.48	32.49
CDY29768	Canola	cytosol	12.86	32.34
CDX73724	Canola	mitochondrion	10.0	32.31
CDY00251	Canola	plastid	31.19	31.87
GSMUA_Achr11P...	Banana	cytosol, mitochondrion	31.67	31.44
CDX81042	Canola	plastid	28.1	30.49
CDY43103	Canola	cytosol	25.71	29.35
CDX78003	Canola	mitochondrion	10.48	28.95
CDX75883	Canola	cytosol	25.24	28.27
CDX92076	Canola	cytosol	25.95	28.17
CDY67178	Canola	cytosol, mitochondrion	25.95	28.09
CDX82400	Canola	cytosol	24.76	27.88
CDY68636	Canola	cytosol	25.48	27.51
CDY53440	Canola	mitochondrion	18.57	26.9
CDY46537	Canola	cytosol, mitochondrion	18.33	26.55
CDY41423	Canola	cytosol, mitochondrion	17.86	25.6
CDY50677	Canola	nucleus	22.38	25.54
CDY47784	Canola	mitochondrion	23.33	25.26
CDY30233	Canola	mitochondrion	23.33	25.26
CDX70272	Canola	cytosol, mitochondrion	17.38	24.91
CDY36861	Canola	nucleus	22.14	24.87
CDY45643	Canola	cytosol	19.05	24.54
CDY64325	Canola	cytosol	21.43	24.13
CDY72577	Canola	cytosol, mitochondrion	16.43	23.79
CDY04907	Canola	endoplasmic reticulum	17.38	21.79
CDY14162	Canola	endoplasmic reticulum	17.38	21.79
CDY41417	Canola	mitochondrion	14.29	20.07
CDX85648	Canola	nucleus	17.38	18.48
CDX91120	Canola	nucleus	16.19	18.13
CDX70505	Canola	nucleus	17.62	16.59
CDX78523	Canola	nucleus	17.38	16.37
CDY19251	Canola	cytosol, mitochondrion	17.62	13.21
CDX83805	Canola	cytosol, mitochondrion	17.38	13.08
CDY26720	Canola	cytosol, mitochondrion	17.38	12.94
CDY41676	Canola	cytosol, plastid	15.48	11.3
CDY67405	Canola	cytosol	15.24	11.05
CDX96693	Canola	nucleus	17.14	10.7
CDY45197	Canola	nucleus, plastid	14.52	10.46
CDY49085	Canola	cytosol	15.24	10.44
CDY04138	Canola	cytosol, plastid	13.81	10.34
CDY04137	Canola	cytosol, plastid	13.81	10.3
CDY39317	Canola	cytosol	14.76	10.21
CDY17427	Canola	cytosol, plastid	13.57	10.05
CDY03037	Canola	cytosol	13.81	10.03
CDX83739	Canola	nucleus	15.48	8.8
CDY62588	Canola	nucleus	15.24	8.64
CDY44186	Canola	nucleus, plastid	14.29	8.21
CDY29389	Canola	nucleus, plastid	14.29	8.02

Protein Annotations

EnsemblPlants:CDY41368	EnsemblPlantsGene:GSBRNA2T00072934001	Gene3D:1.20.5.190	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:DUF4005	InterPro:IPR000048	InterPro:IQ_motif_EF-hand-BS	PANTHER:PTHR32295	PANTHER:PTHR32295:SF13	PFAM:PF00612
PFAM:PF13178	PFscan:PS50096	ProteinID:CDY41368	ProteinID:CDY41368.1	SEG:seg	SMART:SM00015
UniParc:UPI0004EE2C5B	UniProt:A0A078HX92	MapMan:35.2	:	:	:

Description

BnaC03g65130DBnaC03g65130D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HX92]

Coordinates

chrLK032496:+:57414..59698

Molecular Weight (calculated)

46559.9 Da

IEP (calculated)

11.103

GRAVY (calculated)

-0.712

Length

420 amino acids

Sequence
(BLAST)

001: MRKASRWFRN LFGLNKPDPG YPDPSIVTPS RSFPKRRWSF VKSKREKGNA PPNHHPSPPP LRSSTPPPSY LQSSPSDGRR WKQKLVREDE GDKESDDHEV
101: ALAAATSIVT EAAVAAASAA AAVVRLTSTA NFNSGFNDVV AHVSRFDRYR SGRDSLAAIK IQSTFRGYLA RRALRALKGL VRLQAIVRGH IERKKMSVHL
201: RRMHALVRAQ ARVRAHRVIL TSESSSSQSN HTKSSHFQNP GPPTPEKLEY SISSRSSKLG HSHLSKRNGS KARRNRPDIF YSSHLVLDNS GRSGPVYVMP
301: FSPSSSHEET VSKFCTAENS TQLYSATSIS KPSVFTTSSI APSESTKSCC YTDHPSYMAC TESSRAKARS ASAPKSRPQL YHEQSLSKQF GDALHTSFMN
401: KTYPGSGRLN RLGMPIGYRY

Best Arabidopsis Sequence Match ( AT4G23060.1 )
(BLAST)

001: MGKASRWFRS LFGVKKPDPG YPDLSVETPS RSTSSNLKRR WSFVKSKREK ESTPINQVPH TPSLPNSTPP PPSHHQSSPR RRRKQKPMWE DEGSEDSDKH
101: AIAVAAATAA VAEAAVAAAN AAAAVVRLTS TSGRSTRSPV KARFSDGFDD VVAHGSKFYG HGRDSCELAV IKIQSIFRGY LAKRALRALK GLVRLQAIVR
201: GHIERKRMSV HLRRMHALVR AQARVRATRV IVTPESSSSQ SNNTKSSHFQ NPGPPTPEKL EHSISSRSSK LAHSHLFKRN GSKASDNNRL YPAHRETFSA
301: TDEEEKILQI DRKHISSYTR RNRPDMFYSS HLILDNAGLS EPVFATPFSP SSSHEEITSQ FCTAENSPQL YSATSRSKRS AFTASSIAPS DCTKSCCDGD
401: HPSYMACTES SRAKARSASA PKSRPQLFYE RPSSKRFGFV DLPYCGDTKS GPQKGSALHT SFMNKAYPGS GRLDRLGMPI GYRY

Arabidopsis Description

IQD22Calmodulin binding protein IQD22 [Source:UniProtKB/TrEMBL;Acc:Q2NNE0]
SUBAcon: [mitochondrion,nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.