CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus

Predictor Summary:

nucleus 3
plastid 2
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus, plastid
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
ChloroP:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra025777.1-P	Field mustard	nucleus, plastid	98.8	99.33
CDY44186	Canola	nucleus, plastid	92.51	94.66
CDY62588	Canola	nucleus	79.01	79.76
CDX83739	Canola	nucleus	78.74	79.7
AT1G19870.1	Thale cress	nucleus	77.01	72.54
VIT_18s0001g13870.t01	Wine grape	nucleus	37.83	35.73
Solyc04g081210.2.1	Tomato	nucleus	37.17	32.25
KRH51729	Soybean	cytosol	36.23	31.92
PGSC0003DMT400009545	Potato	nucleus	36.9	31.8
CDX90650	Canola	mitochondrion	4.28	31.07
CDY29016	Canola	mitochondrion	4.14	30.1
KRH61064	Soybean	nucleus	25.8	26.55
CDX73724	Canola	mitochondrion	4.28	24.62
TraesCS2A01G492300.1	Wheat	nucleus	27.94	24.27
TraesCS2B01G520500.3	Wheat	nucleus	27.67	24.15
TraesCS2D01G492600.1	Wheat	nucleus	27.67	24.04
Os04t0663100-01	Rice	plasma membrane	28.48	23.85
CDY29768	Canola	cytosol	5.21	23.35
EES11606	Sorghum	nucleus	27.41	23.14
CDY53440	Canola	mitochondrion	8.69	22.41
CDY46537	Canola	cytosol, mitochondrion	8.69	22.41
CDX78003	Canola	mitochondrion	4.55	22.37
Zm00001d026535_P003	Maize	nucleus	26.74	22.2
Zm00001d001953_P003	Maize	nucleus	26.2	21.37
CDY45643	Canola	cytosol	9.09	20.86
CDX85648	Canola	nucleus	10.29	19.49
CDX98994	Canola	mitochondrion	9.09	19.21
CDY50677	Canola	nucleus	9.36	19.02
CDX70019	Canola	cytosol, mitochondrion	8.96	18.93
CDY68636	Canola	cytosol	9.76	18.77
CDY36861	Canola	nucleus	9.36	18.72
CDX78285	Canola	plastid	8.42	18.31
CDX82400	Canola	cytosol	9.09	18.23
CDX91120	Canola	nucleus	9.09	18.13
CDY41676	Canola	cytosol, plastid	13.9	18.09
CDY67178	Canola	cytosol, mitochondrion	9.36	18.04
CDY00253	Canola	plastid	9.49	18.02
CDY67405	Canola	cytosol	13.9	17.96
CDY04137	Canola	cytosol, plastid	13.5	17.94
CDY04138	Canola	cytosol, plastid	13.37	17.83
CDX86928	Canola	mitochondrion, plastid	9.36	17.77
CDY43103	Canola	cytosol	8.69	17.66
CDY17427	Canola	cytosol, plastid	13.37	17.64
CDX75883	Canola	cytosol	8.82	17.6
CDY30233	Canola	mitochondrion	9.09	17.53
CDX78523	Canola	nucleus	10.43	17.49
CDX70505	Canola	nucleus	10.43	17.49
CDX83805	Canola	cytosol, mitochondrion	12.97	17.38
CDX92076	Canola	cytosol	8.96	17.31
CDY00251	Canola	plastid	9.49	17.27
CDX98787	Canola	mitochondrion	6.82	17.23
CDY26720	Canola	cytosol, mitochondrion	12.83	17.02
CDY47784	Canola	mitochondrion	8.82	17.01
CDY03037	Canola	cytosol	13.1	16.95
CDY19251	Canola	cytosol, mitochondrion	12.57	16.79
CDY45197	Canola	nucleus, plastid	12.97	16.64
CDX81042	Canola	plastid	8.42	16.28
CDY64325	Canola	cytosol	8.02	16.09
CDY72577	Canola	cytosol, mitochondrion	6.02	15.52
CDX70272	Canola	cytosol, mitochondrion	6.02	15.36
CDY53133	Canola	nucleus	9.76	15.02
CDY41423	Canola	cytosol, mitochondrion	5.88	15.02
CDX98786	Canola	nucleus	9.49	14.95
CDX94150	Canola	nucleus	9.22	14.87
CDX96693	Canola	nucleus	13.37	14.86
CDY49085	Canola	cytosol	12.03	14.68
CDY41417	Canola	mitochondrion	5.75	14.38
CDY41252	Canola	cytosol, mitochondrion	9.36	14.34
CDY39317	Canola	cytosol	11.63	14.33
CDY04907	Canola	endoplasmic reticulum	6.42	14.33
CDY14162	Canola	endoplasmic reticulum	6.42	14.33
CDY41368	Canola	mitochondrion, plastid	8.02	14.29
CDX76341	Canola	mitochondrion, plastid	8.02	14.29
CDX75112	Canola	cytosol	1.34	7.19

Protein Annotations

EnsemblPlants:CDY29389	EnsemblPlantsGene:GSBRNA2T00042972001	Gene3D:1.20.5.190	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:DUF4005	InterPro:IPR000048	InterPro:IQ_motif_EF-hand-BS	PANTHER:PTHR32295	PANTHER:PTHR32295:SF16	PFAM:PF00612
PFAM:PF13178	PFscan:PS50096	ProteinID:CDY29389	ProteinID:CDY29389.1	SEG:seg	SMART:SM00015
UniParc:UPI0004EF0D0A	UniProt:A0A078GW41	MapMan:35.1	:	:	:

Description

BnaA06g14070DBnaA06g14070D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GW41]

Coordinates

chrLK032236:+:195117..198511

Molecular Weight (calculated)

81199.2 Da

IEP (calculated)

5.291

GRAVY (calculated)

-0.868

Length

748 amino acids

Sequence
(BLAST)

001: MGRSPASSCL RIIACAGGDD ATEPTANKSS RGWSFRKKSG KNRGLITTSV VSDTTPASRT RETLESALLN SPSPDNNIVS EKHTFSVDDD EKKKSQLPVT
101: YVAEPVDEKK KQSAEDKTTE LPVLVESKGT ETEEDDLIGT ELEAKLDVAN AADATLIEKD TTPEVEPEAS EADEVIITNK QSDEEVDDSV IIIIQAAIRG
201: FLARKELLRR KKVVKLQAAF RGHLVRNQAM GSLRCVQAIV KMQTLVRARH STKDGSRVSA ISDKAETNAA TQKLLENKFA KHLMESTPKT KPISIKCDPT
301: KPSSAWSWLE RWMSVSNPEK TSKSDMETEE QQLEGTKSSQ VDVVNSDSTT LETEAETGLP SKVAAHHIEL SETEKMSQYD SPEASAEVDH DLIQSHPLAA
401: KDPEALLEED DQPKPSLKRK ASNPSFIAAQ SKFEELTAST GSSKAMVLSS KDGVLGEEGK TDIDSSEANT TNTKKDQSLE DVALGGSECG TELSVTSSLD
501: SLDKKSDIEG ADSKAESKLL ENGTPKTDQA ELIEIDVKAE TPLAIVEDRK EEDEVEVSVI QHESVISTPD SKKRPAEDGT GLQAVTPMSV TESQATPASQ
601: ASSSVKARKE KSGKSGSSQK RKVSKKITST PPKQETGNGE GKNVREQEEG KEQKSGRRNS FGNDQEARES SGGKNSLPRF MQPTQSAKLK VQEHNSPRSS
701: PDLQEREVSV KKRHSLPVGA NGKQGSSPRI QRSASQAQPG TKERKWQR

Best Arabidopsis Sequence Match ( AT1G19870.1 )
(BLAST)

001: MGRSPASSCL RLISCSGGDD TSADPNSTAL ENKSSGDKRG WSFRKKSGKQ RGLITSVVSE TTPASRTRET LESALLKSPS PDNNNVSEKQ QQSFSVDEKK
101: SQLPVVTYVA EPVDEKKTQS VIEEKTELLS VEEQIDHRTE VSPVIVESKG TETEEDDLIG TELQGPSAAD AAKIEEDVTS EVEMASKVEP EESESDDVII
201: VRKESDEKVD EKLDESVIVV IQAAVRGFLA RRELLRSKKV IKLQAAVRGH LVRSQAMGSL RCVQAIVKMQ AMVRARHSTK DGSRVSATSD KSEPNAAAQK
301: LLENKFAKHL MESTPKTKPI NIKCDPTKPS SAWNWLERWM SVPKPEKTSK ANLTTEEQNL EETQNVKISP QADFVNSDST VENKTETDMP SYEASKVEGQ
401: NVELSETEKM SQYDSPEASA EVYYDSIQSQ PLAAKPDSLL EEPEYVDGQI KHSLKRKVSN PSFIAAQSKF EELTSSTGSN KAMTLSSKDD VLGEEGKTDI
501: DSPDTTNTIK DHSLEDVTPA ELSGSECGTE LSVTSSLDTL EKKSDAEGAE PRVEAKLLED DTFKTDQAEL IEIDVKDATS MGTVEDPKEK VENAKDEVEI
601: SATHHEPVIS TPDSKKRRAE DESGPQAYAL SEGALTPMTI TESQATPASQ ASSSVKARKG KSEKSGSSQK RKVSKKITSS PKQEIGTGEA TEQEEGKEQK
701: SGRRTSFGYD QEARESSGGK NSLPRFMQPT QSAKAKVQEH NSPRSSPDLQ ERDVVSAKKR HSLPGVTNGK QVSPRIQRSA SQAQQGTKDR KWQR

Arabidopsis Description

IQD32Protein IQ-DOMAIN 32 [Source:UniProtKB/Swiss-Prot;Acc:Q9FXI5]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.