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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion

Predictor Summary:
  • plastid 3
  • cytosol 1
  • mitochondrion 6
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 1
  • golgi 1
Predictors GFP MS/MS Papers
Winner Takes All:mitochondrion
Any Predictor:cytosol, mitochondrion, plastid, secretory
BaCelLo:plastid
ChloroP:plastid
EpiLoc:cytosol
iPSORT:mitochondrion
MultiLoc:mitochondrion
Plant-mPloc:plastid
Predotar:mitochondrion
PProwler:secretory
TargetP:mitochondrion
WoLF PSORT:mitochondrion
YLoc:mitochondrion
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra012855.1-P Field mustard mitochondrion 100.0 100.0
CDY29016 Canola mitochondrion 99.03 99.03
AT3G51380.1 Thale cress mitochondrion 89.32 89.32
CDX73724 Canola mitochondrion 87.38 69.23
CDX78003 Canola mitochondrion 89.32 60.53
PGSC0003DMT400009431 Potato mitochondrion 63.11 49.62
VIT_00s0684g00020.t01 Wine grape mitochondrion 62.14 46.72
GSMUA_Achr1P02670_001 Banana mitochondrion 60.19 43.36
KRH07958 Soybean mitochondrion 59.22 43.26
GSMUA_Achr11P... Banana mitochondrion 58.25 30.15
CDY29768 Canola cytosol 36.89 22.75
OQU93295 Sorghum plastid 52.43 19.08
Zm00001d048352_P001 Maize mitochondrion 50.49 18.91
CDY46537 Canola cytosol, mitochondrion 36.89 13.1
TraesCS5A01G502100.1 Wheat cytosol, plastid 48.54 13.02
CDX70019 Canola cytosol, mitochondrion 44.66 12.99
CDX98994 Canola mitochondrion 44.66 12.99
CDY53440 Canola mitochondrion 35.92 12.76
HORVU4Hr1G081190.1 Barley mitochondrion 47.57 12.6
TraesCS4D01G327500.1 Wheat mitochondrion 48.54 12.59
CDX78285 Canola plastid 41.75 12.5
CDY50677 Canola nucleus 44.66 12.5
TraesCS4B01G330700.1 Wheat mitochondrion 47.57 12.37
CDY36861 Canola nucleus 44.66 12.3
CDY45643 Canola cytosol 38.84 12.27
CDY72577 Canola cytosol, mitochondrion 33.01 11.72
CDY64325 Canola cytosol 41.75 11.53
CDY43103 Canola cytosol 39.81 11.14
CDX81042 Canola plastid 41.75 11.11
CDY67178 Canola cytosol, mitochondrion 41.75 11.08
CDY68636 Canola cytosol 41.75 11.05
CDX86928 Canola mitochondrion, plastid 41.75 10.91
CDY00253 Canola plastid 41.75 10.91
CDX82400 Canola cytosol 38.84 10.72
CDX75883 Canola cytosol 38.84 10.67
CDX92076 Canola cytosol 39.81 10.59
CDX70272 Canola cytosol, mitochondrion 30.1 10.58
CDY41423 Canola cytosol, mitochondrion 30.1 10.58
CDY00251 Canola plastid 41.75 10.46
CDY30233 Canola mitochondrion 38.84 10.31
CDY04907 Canola endoplasmic reticulum 33.01 10.15
CDY14162 Canola endoplasmic reticulum 33.01 10.15
CDY47784 Canola mitochondrion 37.86 10.05
CDX94150 Canola nucleus 44.66 9.91
CDX98786 Canola nucleus 45.63 9.89
CDX85648 Canola nucleus 37.86 9.87
CDX91120 Canola nucleus 35.92 9.87
CDX98787 Canola mitochondrion 28.16 9.8
CDY41368 Canola mitochondrion, plastid 39.81 9.76
CDX76341 Canola mitochondrion, plastid 39.81 9.76
CDY53133 Canola nucleus 44.66 9.47
CDY41252 Canola cytosol, mitochondrion 44.66 9.43
CDX78523 Canola nucleus 39.81 9.19
CDX70505 Canola nucleus 39.81 9.19
CDY41417 Canola mitochondrion 26.21 9.03
CDX83805 Canola cytosol, mitochondrion 34.95 6.45
CDY19251 Canola cytosol, mitochondrion 34.95 6.43
CDY26720 Canola cytosol, mitochondrion 34.95 6.38
CDY03037 Canola cytosol 33.01 5.88
CDY67405 Canola cytosol 33.01 5.87
CDY45197 Canola nucleus, plastid 33.01 5.83
CDY41676 Canola cytosol, plastid 32.04 5.74
CDY39317 Canola cytosol 33.01 5.6
CDY49085 Canola cytosol 33.01 5.55
CDX96693 Canola nucleus 34.95 5.35
CDY04138 Canola cytosol, plastid 27.18 4.99
CDY04137 Canola cytosol, plastid 27.18 4.97
CDY17427 Canola cytosol, plastid 27.18 4.94
CDX83739 Canola nucleus 32.04 4.47
CDY44186 Canola nucleus, plastid 31.07 4.38
CDY62588 Canola nucleus 31.07 4.32
CDY29389 Canola nucleus, plastid 31.07 4.28
CDX75112 Canola cytosol 1.94 1.44
Os05t0100008-00 Rice cytosol 0.0 0.0
Protein Annotations
Gene3D:1.20.5.190MapMan:35.2EnsemblPlants:CDX90650ProteinID:CDX90650ProteinID:CDX90650.1GO:GO:0000003
GO:GO:0003674GO:GO:0005488GO:GO:0005515GO:GO:0005575GO:GO:0007339GO:GO:0008150
GO:GO:0009987GO:GO:0016020EnsemblPlantsGene:GSBRNA2T00151301001InterPro:IPR000048InterPro:IQ_motif_EF-hand-BSInterPro:P-loop_NTPase
PFAM:PF00612PIRSF:PIRSF016533PFscan:PS50096PANTHER:PTHR32295PANTHER:PTHR32295:SF86SMART:SM00015
SUPFAM:SSF52540InterPro:Sp17UniParc:UPI00025406DFSEG:seg::
Description
BnaA03g41310D
Coordinates
chrLK031863:+:1349252..1349639
Molecular Weight (calculated)
11790.9 Da
IEP (calculated)
13.230
GRAVY (calculated)
-0.063
Length
103 amino acids
Sequence
(BLAST)
001: MANSKRLFGV VRRNLLRRSP SSITTIRSSI QQTTRENIAA IKIQAFFRGH LARRAFRALK SLVKLQAVAR GVLVRRQARI ALHCMHALAR LQVRVRARQI
101: LSH
Best Arabidopsis Sequence Match ( AT3G51380.1 )
(BLAST)
001: MANSKRLFGV VRRKLLRRSQ SRITIIRSSA PETTREEIAA VKIQAFFRGH LARRAFKALK SLVKLQAVAR GVLVRRQARI ALHCMHALAR LQVRVRARQL
101: LSH
Arabidopsis Description
IQD20At3g51380 [Source:UniProtKB/TrEMBL;Acc:Q9SD11]
SUBAcon: [mitochondrion]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.