Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- mitochondrion 4
- plastid 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4D01G327500.1 | Wheat | mitochondrion | 88.43 | 86.65 |
| TraesCS5A01G502100.1 | Wheat | cytosol, plastid | 84.32 | 85.42 |
| TraesCS4B01G330700.1 | Wheat | mitochondrion | 86.63 | 85.1 |
| Zm00001d048352_P001 | Maize | mitochondrion | 41.9 | 59.27 |
| OQU93295 | Sorghum | plastid | 42.42 | 58.3 |
| Os03t0134800-00 | Rice | mitochondrion | 43.96 | 56.44 |
| AT3G51380.1 | Thale cress | mitochondrion | 13.11 | 49.51 |
| Bra012855.1-P | Field mustard | mitochondrion | 12.6 | 47.57 |
| CDX90650 | Canola | mitochondrion | 12.6 | 47.57 |
| CDY29016 | Canola | mitochondrion | 12.34 | 46.6 |
| GSMUA_Achr1P02670_001 | Banana | mitochondrion | 16.71 | 45.45 |
| PGSC0003DMT400009431 | Potato | mitochondrion | 14.4 | 42.75 |
| VIT_00s0684g00020.t01 | Wine grape | mitochondrion | 13.37 | 37.96 |
| GSMUA_Achr11P... | Banana | mitochondrion | 18.77 | 36.68 |
| CDX73724 | Canola | mitochondrion | 12.08 | 36.15 |
| KRH07958 | Soybean | mitochondrion | 12.34 | 34.04 |
| CDX78003 | Canola | mitochondrion | 13.11 | 33.55 |
| Bra036812.1-P | Field mustard | mitochondrion | 13.11 | 33.12 |
| HORVU3Hr1G070750.1 | Barley | mitochondrion | 12.6 | 19.6 |
| HORVU3Hr1G070760.1 | Barley | mitochondrion | 12.85 | 13.19 |
| HORVU4Hr1G056380.1 | Barley | cytosol, mitochondrion | 11.31 | 13.17 |
| HORVU1Hr1G075880.4 | Barley | cytosol | 11.57 | 13.04 |
| HORVU6Hr1G003870.1 | Barley | cytosol, mitochondrion | 10.03 | 12.66 |
| HORVU0Hr1G005320.2 | Barley | cytosol | 11.05 | 11.81 |
| HORVU4Hr1G073480.2 | Barley | cytosol, mitochondrion | 12.85 | 10.99 |
| HORVU5Hr1G093430.4 | Barley | cytosol | 12.85 | 10.68 |
| HORVU2Hr1G106550.2 | Barley | mitochondrion | 11.83 | 10.6 |
| HORVU7Hr1G082120.1 | Barley | cytosol | 11.83 | 10.57 |
| HORVU3Hr1G019630.3 | Barley | endoplasmic reticulum, plastid | 14.14 | 9.6 |
| HORVU1Hr1G028250.6 | Barley | mitochondrion | 12.08 | 8.92 |
| HORVU5Hr1G050840.5 | Barley | cytosol, plastid | 12.6 | 8.81 |
| HORVU1Hr1G080360.4 | Barley | mitochondrion | 11.31 | 7.47 |
| HORVU3Hr1G067750.8 | Barley | cytosol, plastid | 10.03 | 7.01 |
| HORVU2Hr1G109850.3 | Barley | nucleus | 7.2 | 3.92 |
| HORVU2Hr1G106540.1 | Barley | cytosol, nucleus | 2.83 | 3.64 |
| HORVU2Hr1G124440.1 | Barley | cytosol | 0.51 | 3.28 |
Protein Annotations
| EnsemblPlants:HORVU4Hr1G081190.1 | EnsemblPlantsGene:HORVU4Hr1G081190 | Gene3D:1.20.5.190 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:IPR000048 | InterPro:IQ_motif_EF-hand-BS | PANTHER:PTHR10699 | PANTHER:PTHR10699:SF11 | PFAM:PF00612 | PFscan:PS50096 |
| SEG:seg | SMART:SM00015 | UniParc:UPI000B47BA6D | UniProt:A0A287PUC6 | MapMan:35.2 | : |
Description
No Description!
Coordinates
chrchr4H:-:618515960..618517593
Molecular Weight (calculated)
39933.9 Da
IEP (calculated)
11.944
GRAVY (calculated)
-0.229
Length
389 amino acids
Sequence
(BLAST)
(BLAST)
001: MARSRAMCCL MPSKPSGDAR RRSSAACICC IGPHHRPSGG GGLAPVDADN SSVRTPLTSC CGTGDAVLTP RTPKTPSARR LCGVRSRTPR RAQQVRRFTP
101: APAPAPAAAP AAPARSPVTA AASVGAAPVP TPVKAPVSAA ASAGVPLVAP PPARTPVAPA AAAGALPVAP PPATTPAAAA GSAGAALAPP PARTPRTPST
201: PIGRTQRVCC VTSAAPAQAG NAKSKSGTAR RRWLSSASKA AAQAPRNTAR AASSTVRESS TNTREVAKAV HSAAPLPRAV EPAPAKEDES SVCSNEEYAL
301: LCREGFSRED VAAVTIQAYF RAHLARRAFK ALRSLVRLQA VARGAYVRRQ AEVAVHCMQA MARLQARVRT RQALAKPRDN DDKLLLLHN
101: APAPAPAAAP AAPARSPVTA AASVGAAPVP TPVKAPVSAA ASAGVPLVAP PPARTPVAPA AAAGALPVAP PPATTPAAAA GSAGAALAPP PARTPRTPST
201: PIGRTQRVCC VTSAAPAQAG NAKSKSGTAR RRWLSSASKA AAQAPRNTAR AASSTVRESS TNTREVAKAV HSAAPLPRAV EPAPAKEDES SVCSNEEYAL
301: LCREGFSRED VAAVTIQAYF RAHLARRAFK ALRSLVRLQA VARGAYVRRQ AEVAVHCMQA MARLQARVRT RQALAKPRDN DDKLLLLHN
001: MANSKRLFGV VRRKLLRRSQ SRITIIRSSA PETTREEIAA VKIQAFFRGH LARRAFKALK SLVKLQAVAR GVLVRRQARI ALHCMHALAR LQVRVRARQL
101: LSH
101: LSH
Arabidopsis Description
IQD20At3g51380 [Source:UniProtKB/TrEMBL;Acc:Q9SD11]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.