Factsheet for TraesCS4D01G327500.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 6
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion, plastid
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4B01G330700.1	Wheat	mitochondrion	93.95	94.19
TraesCS5A01G502100.1	Wheat	cytosol, plastid	89.67	92.71
HORVU4Hr1G081190.1	Barley	mitochondrion	86.65	88.43
Zm00001d048352_P001	Maize	mitochondrion	41.06	59.27
OQU93295	Sorghum	plastid	41.81	58.66
Os03t0134800-00	Rice	mitochondrion	43.58	57.1
AT3G51380.1	Thale cress	mitochondrion	12.85	49.51
Bra012855.1-P	Field mustard	mitochondrion	12.59	48.54
CDX90650	Canola	mitochondrion	12.59	48.54
CDY29016	Canola	mitochondrion	12.34	47.57
GSMUA_Achr1P02670_001	Banana	mitochondrion	15.87	44.06
PGSC0003DMT400009431	Potato	mitochondrion	13.6	41.22
CDX73724	Canola	mitochondrion	12.09	36.92
VIT_00s0684g00020.t01	Wine grape	mitochondrion	12.34	35.77
GSMUA_Achr11P...	Banana	mitochondrion	17.38	34.67
CDX78003	Canola	mitochondrion	13.1	34.21
Bra036812.1-P	Field mustard	mitochondrion	13.1	33.77
KRH07958	Soybean	mitochondrion	11.84	33.33
TraesCS3D01G275900.1	Wheat	mitochondrion	12.59	13.16
TraesCS1D01G344200.1	Wheat	cytosol	11.34	13.01
TraesCS2D01G398300.1	Wheat	cytosol, mitochondrion	15.11	12.99
TraesCS3D01G109900.1	Wheat	cytosol, mitochondrion	14.11	12.15
TraesCS5D01G387500.1	Wheat	cytosol	13.1	11.23
TraesCS1D01G123800.1	Wheat	cytosol	12.59	11.01
TraesCS2D01G470000.1	Wheat	cytosol, mitochondrion	12.09	10.98
TraesCS4D01G275700.3	Wheat	cytosol, mitochondrion	12.85	10.56
TraesCS5D01G168000.2	Wheat	nucleus	12.59	10.42
TraesCS7D01G341000.1	Wheat	cytosol	11.59	10.38
TraesCS1D01G361800.3	Wheat	cytosol, mitochondrion, plastid	10.58	7.25
TraesCS3D01G247300.1	Wheat	cytosol, plastid	9.82	7.12
TraesCS2D01G492600.1	Wheat	nucleus	9.32	4.3

Protein Annotations

EnsemblPlants:TraesCS4D01G327500.1	EnsemblPlantsGene:TraesCS4D01G327500	Gene3D:1.20.5.190	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:IPR000048	InterPro:IQ_motif_EF-hand-BS	PANTHER:PTHR10699	PANTHER:PTHR10699:SF11	PFAM:PF00612	PFscan:PS50096
SEG:seg	SMART:SM00015	MapMan:35.2	:	:	:

Description

No Description!

Coordinates

chr4D:+:486907946..486909255

Molecular Weight (calculated)

40632.9 Da

IEP (calculated)

11.986

GRAVY (calculated)

-0.206

Length

397 amino acids

Sequence
(BLAST)

001: MPRTRAMCCL MPSKPSGDAR RRSSAACICC IGPHHRPSGG GALAPVDADN SSVRTPLTSC CGAGDAVRTP RTPKTPSARR LCGVRSRTPR RAQQVRRFTP
101: APAPAPAAPA APARAAAPAA PARTPVAAAA SAGAALAVPP VKTPVSAAAS AGVPLVAPPP ARTPVAAAPS AGAALVAPPP ARTPVAAAAA SAGAALAPPP
201: ARTPRTPSTP IGRTQRVCCV TTAAPAQAGN AKSKSGTARR RWLSSASKAV AQTRGAVSGN VRDSGTNPRA NGHVAKAVHR AAPLAQAVEP PAPAKEDESV
301: CSDEEYAMLC REGFSREDVA AVTIQAYFRA HLARRAFKAL RSLVRLQAVA RGAYVRRQAE VAVHCMQAMA RLQARVRSRQ ALAKPKDNDD KLLLLQN

Best Arabidopsis Sequence Match ( AT3G51380.1 )
(BLAST)

001: MANSKRLFGV VRRKLLRRSQ SRITIIRSSA PETTREEIAA VKIQAFFRGH LARRAFKALK SLVKLQAVAR GVLVRRQARI ALHCMHALAR LQVRVRARQL
101: LSH

Arabidopsis Description

IQD20At3g51380 [Source:UniProtKB/TrEMBL;Acc:Q9SD11]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.