Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 2
- mitochondrion 2
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7A01G332500.1 | Wheat | cytosol, mitochondrion | 95.03 | 95.03 |
| TraesCS7B01G244900.1 | Wheat | cytosol | 93.23 | 93.23 |
| HORVU7Hr1G082120.1 | Barley | cytosol | 91.42 | 93.1 |
| TraesCS2D01G470000.1 | Wheat | cytosol, mitochondrion | 21.67 | 21.97 |
| TraesCS3D01G109900.1 | Wheat | cytosol, mitochondrion | 22.12 | 21.26 |
| TraesCS1D01G123800.1 | Wheat | cytosol | 21.44 | 20.93 |
| TraesCS1D01G344200.1 | Wheat | cytosol | 16.25 | 20.81 |
| TraesCS2D01G398300.1 | Wheat | cytosol, mitochondrion | 21.44 | 20.56 |
| TraesCS4D01G275700.3 | Wheat | cytosol, mitochondrion | 22.35 | 20.5 |
| TraesCS5D01G168000.2 | Wheat | nucleus | 21.22 | 19.58 |
| TraesCS5D01G387500.1 | Wheat | cytosol | 20.32 | 19.44 |
| TraesCS3D01G275900.1 | Wheat | mitochondrion | 16.03 | 18.68 |
| TraesCS3D01G247300.1 | Wheat | cytosol, plastid | 18.28 | 14.78 |
| TraesCS1D01G361800.3 | Wheat | cytosol, mitochondrion, plastid | 18.51 | 14.16 |
| TraesCS4D01G327500.1 | Wheat | mitochondrion | 10.38 | 11.59 |
| TraesCS2D01G492600.1 | Wheat | nucleus | 15.58 | 8.01 |
Protein Annotations
| EnsemblPlants:TraesCS7D01G341000.1 | EnsemblPlantsGene:TraesCS7D01G341000 | Gene3D:1.20.5.190 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:IPR000048 | InterPro:IQ_motif_EF-hand-BS | PANTHER:PTHR32295 | PANTHER:PTHR32295:SF20 | PFAM:PF00612 | PFscan:PS50096 |
| SEG:seg | SMART:SM00015 | MapMan:35.2 | : | : | : |
Description
No Description!
Coordinates
chr7D:-:436878056..436881203
Molecular Weight (calculated)
48513.9 Da
IEP (calculated)
11.099
GRAVY (calculated)
-0.774
Length
443 amino acids
Sequence
(BLAST)
(BLAST)
001: MGKKPGGAGW LATVRKVFKT SPSSSPSKDP RHAKKGLGGE EQEAAEILSV EHFPATDTSP ELTNEGSVGS VAGWAREGGG VEAEARRARR AMASRMARLA
101: ALRERAAGRE DRAAVRIQAF YRGYLARRAL RALRGLVRLQ ALVRGHQVRR QVHHTMRCMQ ALVRAQDRVR ARRLTSHVAT RGRPAPVVPA HGARRQSYGH
201: DRLFFDDHQD EEDAETAAQV RRPRNRHGSV GNLSPFQEGW DAVTRAGAMH RHDDAAAWPP AYAHDFQQHK IKFHHEQMRL ERDELDKRKA GWHWLERCMA
301: PNSAPPEQAN QHLAAAETSY VTAATATATE GVSERTVEME PSRKSSPTDL YPVRAEVIPG YMAATQSARA KARMAPPVAP RAHARSRSGS VALGGGSTAN
401: SGWSTSNNGD RAAQQRELYS PESSCSGDRS PPTLGGRGRV AYA
101: ALRERAAGRE DRAAVRIQAF YRGYLARRAL RALRGLVRLQ ALVRGHQVRR QVHHTMRCMQ ALVRAQDRVR ARRLTSHVAT RGRPAPVVPA HGARRQSYGH
201: DRLFFDDHQD EEDAETAAQV RRPRNRHGSV GNLSPFQEGW DAVTRAGAMH RHDDAAAWPP AYAHDFQQHK IKFHHEQMRL ERDELDKRKA GWHWLERCMA
301: PNSAPPEQAN QHLAAAETSY VTAATATATE GVSERTVEME PSRKSSPTDL YPVRAEVIPG YMAATQSARA KARMAPPVAP RAHARSRSGS VALGGGSTAN
401: SGWSTSNNGD RAAQQRELYS PESSCSGDRS PPTLGGRGRV AYA
001: MGKKGSGGWF STVKKKVFKS SPKDSKRENN IGSNNADIWQ QQHDTQEVVS FEHFPAESSP EISHDVESTA STPATNVGDR KHAMAVAIAT AAAAEAAVAA
101: AQAAAKVVRL AGYNRQTEED SAAVLIQSHY RGYLARRALR ALKGLVRLQA LVRGNHVRKQ AQMTMKCMQA LVRVQGRVRA RRLQVAHDRF KKQFEEEEKR
201: SGMEKPNKGF ANLKTEREKP KKLHEVNRTS LYQTQGKEKE RSEGMMKRER ALAYAYTYQR QMQHTNSEEG IGLSSNGPDR NQWAWNWLDH WMSSQPYTGR
301: QTGPGPGPGQ YNPPPYPPFP TAAATTTSDD VSEKTVEMDV TTPTSLKGNI IGLIDREYID LGSYRQGHKQ RKSPTHIPSY MAPTASAKAK VRDQGPTVKL
401: QGTSFMPYWN SSTKNGSVNG SGCDSSSSGG AITTGYPGPR SPNPKSDIRR KPVSPSQSPT GFGKRGWRHD H
101: AQAAAKVVRL AGYNRQTEED SAAVLIQSHY RGYLARRALR ALKGLVRLQA LVRGNHVRKQ AQMTMKCMQA LVRVQGRVRA RRLQVAHDRF KKQFEEEEKR
201: SGMEKPNKGF ANLKTEREKP KKLHEVNRTS LYQTQGKEKE RSEGMMKRER ALAYAYTYQR QMQHTNSEEG IGLSSNGPDR NQWAWNWLDH WMSSQPYTGR
301: QTGPGPGPGQ YNPPPYPPFP TAAATTTSDD VSEKTVEMDV TTPTSLKGNI IGLIDREYID LGSYRQGHKQ RKSPTHIPSY MAPTASAKAK VRDQGPTVKL
401: QGTSFMPYWN SSTKNGSVNG SGCDSSSSGG AITTGYPGPR SPNPKSDIRR KPVSPSQSPT GFGKRGWRHD H
Arabidopsis Description
iqd21IQ-domain 21 [Source:UniProtKB/TrEMBL;Acc:F4IWT1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.