Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 2
- mitochondrion 2
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7A01G332500.1 | Wheat | cytosol, mitochondrion | 94.58 | 94.58 |
| TraesCS7D01G341000.1 | Wheat | cytosol | 93.23 | 93.23 |
| HORVU7Hr1G082120.1 | Barley | cytosol | 89.16 | 90.8 |
| TraesCS1B01G354600.1 | Wheat | cytosol, mitochondrion | 17.16 | 22.42 |
| TraesCS1B01G142100.1 | Wheat | cytosol | 21.44 | 20.93 |
| TraesCS3B01G127100.1 | Wheat | cytosol | 21.44 | 20.52 |
| TraesCS2B01G492900.1 | Wheat | cytosol, mitochondrion | 20.09 | 20.41 |
| TraesCS2B01G418900.1 | Wheat | cytosol, mitochondrion | 20.77 | 20.0 |
| TraesCS5B01G381100.1 | Wheat | cytosol, mitochondrion | 20.77 | 19.91 |
| TraesCS4B01G277100.2 | Wheat | cytosol, mitochondrion | 21.44 | 19.71 |
| TraesCS3B01G309600.1 | Wheat | mitochondrion | 16.7 | 19.63 |
| TraesCS5B01G160400.1 | Wheat | cytosol | 20.54 | 19.12 |
| TraesCS1B01G374100.2 | Wheat | cytosol, mitochondrion | 19.41 | 14.85 |
| TraesCS3B01G276000.1 | Wheat | cytosol, plastid | 18.06 | 14.6 |
| TraesCS4B01G330700.1 | Wheat | mitochondrion | 10.16 | 11.36 |
| TraesCS2B01G520500.3 | Wheat | nucleus | 15.12 | 7.82 |
Protein Annotations
| EnsemblPlants:TraesCS7B01G244900.1 | EnsemblPlantsGene:TraesCS7B01G244900 | Gene3D:1.20.5.190 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:IPR000048 | InterPro:IQ_motif_EF-hand-BS | PANTHER:PTHR32295 | PANTHER:PTHR32295:SF20 | PFAM:PF00612 | PFscan:PS50096 |
| SEG:seg | SMART:SM00015 | MapMan:35.2 | : | : | : |
Description
No Description!
Coordinates
chr7B:-:453334746..453337634
Molecular Weight (calculated)
48519.0 Da
IEP (calculated)
10.926
GRAVY (calculated)
-0.757
Length
443 amino acids
Sequence
(BLAST)
(BLAST)
001: MGKKPGGAGW LATVRKVFKT NPSSSPAKHS RHANKGLGGE EQEAAEILSV EHFPAADTSP EVTNEGSGSS VAWRAREGGG VEAEDRRARR AMASRMARLA
101: ALRERAAGRE DRAAVRIQAF YRGYLARRAL RALRGLVRLQ ALVRGHQVRR QVHHTMRCMQ ALVRAQDRVR ARRLTSHVAT PGRPAPVVPS HGARRQSYGH
201: DRLFFDDHQH EEDAETAAQV RRLRNRHGSI GNLSPFQDGW DAVTRAGALR RHDDALACPP AYAYDFQQPK MKFHHEQMQL ERDELDKRKA GWHWLERCMA
301: PNSAPPEQAN QHLAAAETSY VTAATATATE GVSERTVEME PSRKSPPTDL YPVHAEVIPG YMAATQSARA KARMAPPIAP RAHARSRSGS VALGGGSTAS
401: SGWSTSNNGD RAAQQRELYS PESSCSGDRS PPTLGGRGRV AYA
101: ALRERAAGRE DRAAVRIQAF YRGYLARRAL RALRGLVRLQ ALVRGHQVRR QVHHTMRCMQ ALVRAQDRVR ARRLTSHVAT PGRPAPVVPS HGARRQSYGH
201: DRLFFDDHQH EEDAETAAQV RRLRNRHGSI GNLSPFQDGW DAVTRAGALR RHDDALACPP AYAYDFQQPK MKFHHEQMQL ERDELDKRKA GWHWLERCMA
301: PNSAPPEQAN QHLAAAETSY VTAATATATE GVSERTVEME PSRKSPPTDL YPVHAEVIPG YMAATQSARA KARMAPPIAP RAHARSRSGS VALGGGSTAS
401: SGWSTSNNGD RAAQQRELYS PESSCSGDRS PPTLGGRGRV AYA
001: MGKKGSGGWF STVKKKVFKS SPKDSKRENN IGSNNADIWQ QQHDTQEVVS FEHFPAESSP EISHDVESTA STPATNVGDR KHAMAVAIAT AAAAEAAVAA
101: AQAAAKVVRL AGYNRQTEED SAAVLIQSHY RGYLARRALR ALKGLVRLQA LVRGNHVRKQ AQMTMKCMQA LVRVQGRVRA RRLQVAHDRF KKQFEEEEKR
201: SGMEKPNKVG FANLKTEREK PKKLHEVNRT SLYQTQGKEK ERSEGMMKRE RALAYAYTYQ RQMQHTNSEE GIGLSSNGPD RNQWAWNWLD HWMSSQPYTG
301: RQTGPGPGPG QYNPPPYPPF PTAAATTTSD DVSEKTVEMD VTTPTSLKGN IIGLIDREYI DLGSYRQGHK QRKSPTHIPS YMAPTASAKA KVRDQGPTVK
401: LQGTSFMPYW NSSTKNGSVN GSGCDSSSSG GAITTGYPGP RSPNPKSDIR RKPVSPSQSP TGFGKRGWRH DH
101: AQAAAKVVRL AGYNRQTEED SAAVLIQSHY RGYLARRALR ALKGLVRLQA LVRGNHVRKQ AQMTMKCMQA LVRVQGRVRA RRLQVAHDRF KKQFEEEEKR
201: SGMEKPNKVG FANLKTEREK PKKLHEVNRT SLYQTQGKEK ERSEGMMKRE RALAYAYTYQ RQMQHTNSEE GIGLSSNGPD RNQWAWNWLD HWMSSQPYTG
301: RQTGPGPGPG QYNPPPYPPF PTAAATTTSD DVSEKTVEMD VTTPTSLKGN IIGLIDREYI DLGSYRQGHK QRKSPTHIPS YMAPTASAKA KVRDQGPTVK
401: LQGTSFMPYW NSSTKNGSVN GSGCDSSSSG GAITTGYPGP RSPNPKSDIR RKPVSPSQSP TGFGKRGWRH DH
Arabidopsis Description
iqd21IQ-domain 21 [Source:UniProtKB/TrEMBL;Acc:F4IWT1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.