Factsheet for TraesCS3B01G309600.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 4
nucleus 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	cytosol, mitochondrion, nucleus
MultiLoc:	mitochondrion
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G275900.1	Wheat	mitochondrion	95.76	95.0
TraesCS3A01G275900.1	Wheat	mitochondrion	94.16	94.92
HORVU3Hr1G070760.1	Barley	mitochondrion	92.04	91.56
HORVU3Hr1G070750.1	Barley	mitochondrion	59.68	90.0
Zm00001d012767_P001	Maize	cytosol, mitochondrion	47.48	54.74
KXG33342	Sorghum	mitochondrion	57.29	54.55
TraesCS1B01G354600.1	Wheat	cytosol, mitochondrion	48.54	53.98
Zm00001d043510_P001	Maize	mitochondrion, nucleus	53.05	48.78
Os01t0743100-00	Rice	cytosol, mitochondrion	40.85	36.07
TraesCS1B01G142100.1	Wheat	cytosol	29.18	24.23
TraesCS3B01G127100.1	Wheat	cytosol	29.44	23.97
TraesCS2B01G418900.1	Wheat	cytosol, mitochondrion	27.59	22.61
TraesCS2B01G492900.1	Wheat	cytosol, mitochondrion	25.46	22.02
TraesCS5B01G381100.1	Wheat	cytosol, mitochondrion	25.99	21.21
TraesCS4B01G277100.2	Wheat	cytosol, mitochondrion	27.06	21.16
TraesCS5B01G160400.1	Wheat	cytosol	22.28	17.65
TraesCS7B01G244900.1	Wheat	cytosol	19.63	16.7
TraesCS1B01G374100.2	Wheat	cytosol, mitochondrion	21.49	13.99
TraesCS3B01G276000.1	Wheat	cytosol, plastid	19.1	13.14
TraesCS4B01G330700.1	Wheat	mitochondrion	13.0	12.37
TraesCS2B01G520500.3	Wheat	nucleus	20.16	8.87

Protein Annotations

EnsemblPlants:TraesCS3B01G309600.1	EnsemblPlantsGene:TraesCS3B01G309600	Gene3D:1.20.5.190	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:DUF4005	InterPro:IPR000048	InterPro:IQ_motif_EF-hand-BS	InterPro:P-loop_NTPase	PANTHER:PTHR32295	PANTHER:PTHR32295:SF17
PFAM:PF00612	PFAM:PF13178	PFscan:PS50096	SEG:seg	SMART:SM00015	SUPFAM:SSF52540
MapMan:35.2	:	:	:	:	:

Description

No Description!

Coordinates

chr3B:-:498325140..498327271

Molecular Weight (calculated)

42102.3 Da

IEP (calculated)

11.560

GRAVY (calculated)

-0.780

Length

377 amino acids

Sequence
(BLAST)

001: MGRAMRWLKR LLTGRKEAHG GGKEIHAATD WHDAAAVKES TKRWSFVKQR KSGVDAGKRP SEPLAAALEV KPCRCAGGEQ VGAREEKAAV VIQKAFRGYL
101: ARKALRALRS LVKLQALVRG YLVRKQAATT LHRLQALMRL QADSRAFKSA SYRKSMEQER IVAQDARMRT PPTKPGHRRR LSDSTDSNYE RSPRIVEMDT
201: CHLRSRSSRM VSSGRYATDR SSGRLAPDLA PLFSPRSVKQ PPRLSIRREP VRHAKTAQNT PRFSGADPPY TYDSPAKSVD GLAARPLWHR DLLSSPRYMA
301: GTASSAARLR CQSAPRQPAE APRASLTQRD VPAGPRKSTC TRTQHGGLCF HSSDAAHTRR SDLSNDAARD YYLDRMW

Best Arabidopsis Sequence Match ( AT3G16490.1 )
(BLAST)

001: MGRAARWFKG IFGMKKSKEK ENCVSGDVGG EAGGSNIHRK VLQADSVWLR TYLAETDKEQ NKHAIAVAAA TAAAADAAVA AAQAAVAVVR LTSNGRSGGY
101: SGNAMERWAA VKIQSVFKGY LARKALRALK GLVKLQALVR GYLVRKRAAE TLHSMQALIR AQTSVRSQRI NRNNMFHPRH SLERLDDSRS EIHSKRISIS
201: VEKQSNHNNN AYDETSPKIV EIDTYKTKSR SKRMNVAVSE CGDDFIYQAK DFEWSFPGEK CKFPTAQNTP RFSSSMANNN YYYTPPSPAK SVCRDACFRP
301: SYPGLMTPSY MANTQSFKAK VRSHSAPRQR PDRKRLSLDE IMAARSSVSG VRMVQPQPQP QTQTQQQKRS PCSYDHQFRQ NETDFRFYN

Arabidopsis Description

IQD26At3g16490 [Source:UniProtKB/TrEMBL;Acc:Q9LK76]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.