Factsheet for TraesCS1B01G354600.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, cytosol

Predictor Summary:

mitochondrion 4
cytosol 2
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1D01G344200.1	Wheat	cytosol	94.4	92.49
TraesCS1A01G341900.1	Wheat	cytosol	94.69	91.98
Os05t0521900-00	Rice	cytosol	70.21	64.85
Zm00001d010795_P001	Maize	cytosol, mitochondrion	60.47	62.88
KXG22374	Sorghum	mitochondrion	67.85	57.64
Zm00001d038793_P001	Maize	cytosol	64.6	57.63
TraesCS3B01G309600.1	Wheat	mitochondrion	53.98	48.54
HORVU1Hr1G075880.4	Barley	cytosol	48.97	48.12
TraesCS3B01G127100.1	Wheat	cytosol	33.92	24.84
TraesCS1B01G142100.1	Wheat	cytosol	33.04	24.67
TraesCS2B01G418900.1	Wheat	cytosol, mitochondrion	29.5	21.74
TraesCS5B01G381100.1	Wheat	cytosol, mitochondrion	29.5	21.64
TraesCS2B01G492900.1	Wheat	cytosol, mitochondrion	27.14	21.1
TraesCS4B01G277100.2	Wheat	cytosol, mitochondrion	28.61	20.12
TraesCS7B01G244900.1	Wheat	cytosol	22.42	17.16
TraesCS5B01G160400.1	Wheat	cytosol	23.89	17.02
TraesCS1B01G374100.2	Wheat	cytosol, mitochondrion	23.3	13.64
TraesCS3B01G276000.1	Wheat	cytosol, plastid	20.65	12.77
TraesCS4B01G330700.1	Wheat	mitochondrion	13.86	11.87
TraesCS2B01G520500.3	Wheat	nucleus	20.94	8.28

Protein Annotations

EnsemblPlants:TraesCS1B01G354600.1	EnsemblPlantsGene:TraesCS1B01G354600	Gene3D:1.20.5.190	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:DUF4005	InterPro:IPR000048	InterPro:IQ_motif_EF-hand-BS	InterPro:P-loop_NTPase	PANTHER:PTHR32295	PANTHER:PTHR32295:SF30
PFAM:PF00612	PFAM:PF13178	PFscan:PS50096	SEG:seg	SMART:SM00015	SUPFAM:SSF52540
MapMan:35.2	:	:	:	:	:

Description

No Description!

Coordinates

chr1B:-:584324605..584326177

Molecular Weight (calculated)

37098.2 Da

IEP (calculated)

11.510

GRAVY (calculated)

-0.755

Length

339 amino acids

Sequence
(BLAST)

001: MGRAMRWLRK LLNGGGGKKE GAKEQSAAAP PIERRRWSFA KARSSVADAS RRPSVTAVVA GELSQSQARP CGCGQARETE AAVLIQKAFR GYLARKALRA
101: LKSLVKLQAL VRGYLVRKQA ATTLHRLQAL MRLQASSQAL KNLSSRRSIE QERKTSAPVA HRRRLSEGGA GDDRSPRIVE MDTCQLRSRS SRIAGRYAAA
201: DPQPQPPPLS SPLAYFCKPP SRLQLRELEP RQPKTTQNTP RLPAIVPGGS PAKGRPSCGG GRESSSPRYM AETASSVARG RCQSAPRQRH GNNAAGSRKA
301: APQSQDSFSF KSSDATSRVE DYSEMSDEVT RDYYLDQLW

Best Arabidopsis Sequence Match ( AT3G16490.1 )
(BLAST)

001: MGRAARWFKG IFGMKKSKEK ENCVSGDVGG EAGGSNIHRK VLQADSVWLR TYLAETDKEQ NKHAIAVAAA TAAAADAAVA AAQAAVAVVR LTSNGRSGGY
101: SGNAMERWAA VKIQSVFKGY LARKALRALK GLVKLQALVR GYLVRKRAAE TLHSMQALIR AQTSVRSQRI NRNNMFHPRH SLERLDDSRS EIHSKRISIS
201: VEKQSNHNNN AYDETSPKIV EIDTYKTKSR SKRMNVAVSE CGDDFIYQAK DFEWSFPGEK CKFPTAQNTP RFSSSMANNN YYYTPPSPAK SVCRDACFRP
301: SYPGLMTPSY MANTQSFKAK VRSHSAPRQR PDRKRLSLDE IMAARSSVSG VRMVQPQPQP QTQTQQQKRS PCSYDHQFRQ NETDFRFYN

Arabidopsis Description

IQD26At3g16490 [Source:UniProtKB/TrEMBL;Acc:Q9LK76]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.