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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid, nucleus

Predictor Summary:
  • nucleus 3
  • plastid 2
  • cytosol 1
  • mitochondrion 2
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra024806.1-P Field mustard cytosol, plastid 96.74 96.41
CDY03037 Canola cytosol 89.88 90.66
CDY04137 Canola cytosol, plastid 78.56 81.35
CDY17427 Canola cytosol, plastid 78.9 81.13
CDY04138 Canola cytosol, plastid 78.04 81.11
CDY41676 Canola cytosol, plastid 79.59 80.7
CDY67405 Canola cytosol 79.76 80.31
AT2G02790.1 Thale cress cytosol 79.25 72.64
CDY39317 Canola cytosol 51.63 49.59
CDY49085 Canola cytosol 50.43 47.96
PGSC0003DMT400045444 Potato cytosol, plastid 33.62 35.25
Solyc05g007130.2.1 Tomato cytosol, plastid 33.28 35.21
Os05t0535900-01 Rice cytosol 33.45 33.97
GSMUA_Achr8P26180_001 Banana mitochondrion 30.02 33.33
Zm00001d038838_P001 Maize mitochondrion 32.59 33.1
CDX90650 Canola mitochondrion 5.83 33.01
KRH74806 Soybean cytosol, plastid 31.73 32.86
Zm00001d011138_P003 Maize cytosol, plastid 33.28 32.83
KXG22418 Sorghum cytosol, plastid 32.59 32.82
CDY29016 Canola mitochondrion 5.66 32.04
KRH69321 Soybean cytosol, mitochondrion 30.87 31.97
TraesCS1B01G374100.2 Wheat cytosol, mitochondrion 31.73 31.95
GSMUA_AchrUn_... Banana mitochondrion 27.62 31.82
KRG99144 Soybean cytosol, plastid 29.85 31.81
KRH45861 Soybean plastid 29.85 31.81
TraesCS1A01G357500.3 Wheat cytosol, mitochondrion, plastid 31.22 31.43
TraesCS1D01G361800.3 Wheat cytosol, mitochondrion, plastid 31.22 31.43
KXG33252 Sorghum cytosol 30.02 31.31
HORVU1Hr1G080360.4 Barley mitochondrion 31.39 31.07
CDX83805 Canola cytosol, mitochondrion 29.5 30.82
CDY26720 Canola cytosol, mitochondrion 29.67 30.67
CDY19251 Canola cytosol, mitochondrion 29.16 30.36
TraesCS3A01G244100.1 Wheat cytosol, plastid 28.3 30.11
TraesCS3B01G276000.1 Wheat cytosol, plastid 28.3 30.11
Zm00001d043655_P002 Maize mitochondrion 29.67 30.09
Os01t0716200-01 Rice nucleus 29.5 29.97
TraesCS3D01G247300.1 Wheat cytosol, plastid 27.96 29.74
HORVU3Hr1G067750.8 Barley cytosol, plastid 27.96 29.32
CDX73724 Canola mitochondrion 6.0 26.92
CDX96693 Canola nucleus 30.02 26.0
CDY29768 Canola cytosol 7.03 24.55
CDX78003 Canola mitochondrion 6.35 24.34
CDY50677 Canola nucleus 14.24 22.55
CDY36861 Canola nucleus 14.07 21.93
CDY53440 Canola mitochondrion 10.63 21.38
CDY46537 Canola cytosol, mitochondrion 10.63 21.38
CDX98994 Canola mitochondrion 12.18 20.06
CDX70019 Canola cytosol, mitochondrion 12.01 19.77
CDY64325 Canola cytosol 12.35 19.3
CDY45643 Canola cytosol 10.63 19.02
CDX78285 Canola plastid 10.98 18.6
CDX85648 Canola nucleus 12.52 18.48
CDX91120 Canola nucleus 11.32 17.6
CDY43103 Canola cytosol 10.98 17.39
CDX70505 Canola nucleus 13.21 17.26
CDY68636 Canola cytosol 11.49 17.22
CDX75883 Canola cytosol 10.98 17.07
CDX78523 Canola nucleus 13.04 17.04
CDX82400 Canola cytosol 10.81 16.89
CDY00253 Canola plastid 11.32 16.75
CDX86928 Canola mitochondrion, plastid 11.32 16.75
CDX81042 Canola plastid 10.98 16.54
CDX92076 Canola cytosol 10.98 16.54
CDY67178 Canola cytosol, mitochondrion 10.98 16.49
CDY00251 Canola plastid 11.32 16.06
CDY30233 Canola mitochondrion 10.46 15.72
CDX98787 Canola mitochondrion 7.89 15.54
CDY47784 Canola mitochondrion 10.12 15.21
CDY72577 Canola cytosol, mitochondrion 7.38 14.83
CDX76341 Canola mitochondrion, plastid 10.63 14.76
CDY53133 Canola nucleus 12.18 14.61
CDY62588 Canola nucleus 18.52 14.57
CDY41368 Canola mitochondrion, plastid 10.46 14.52
CDX83739 Canola nucleus 18.35 14.48
CDY41417 Canola mitochondrion 7.38 14.38
CDY41252 Canola cytosol, mitochondrion 11.84 14.14
CDX94150 Canola nucleus 11.15 14.01
CDX98786 Canola nucleus 11.32 13.89
CDY44186 Canola nucleus, plastid 16.98 13.54
CDY41423 Canola cytosol, mitochondrion 6.69 13.31
CDX70272 Canola cytosol, mitochondrion 6.52 12.97
CDY29389 Canola nucleus, plastid 16.64 12.97
CDY14162 Canola endoplasmic reticulum 6.69 11.64
CDY04907 Canola endoplasmic reticulum 6.69 11.64
CDX75112 Canola cytosol 1.89 7.91
Protein Annotations
EnsemblPlants:CDY45197EnsemblPlantsGene:GSBRNA2T00081625001Gene3D:1.20.5.190GO:GO:0003674GO:GO:0005488GO:GO:0005515
InterPro:DUF4005InterPro:IPR000048InterPro:IQ_motif_EF-hand-BSPANTHER:PTHR32295PANTHER:PTHR32295:SF48PFAM:PF00612
PFAM:PF13178PFscan:PS50096ProteinID:CDY45197ProteinID:CDY45197.1SEG:segSMART:SM00015
UniParc:UPI0004EE6B0FUniProt:A0A078I562MapMan:35.1:::
Description
BnaA06g34010DBnaA06g34010D protein [Source:UniProtKB/TrEMBL;Acc:A0A078I562]
Coordinates
chrLK032617:-:176834..179824
Molecular Weight (calculated)
63544.1 Da
IEP (calculated)
10.322
GRAVY (calculated)
-0.851
Length
583 amino acids
Sequence
(BLAST)
001: MGKTPSPGKW IKSLLGKKSS KSSLEKGSEK LRSAKKKENV VKVVNNVSNL PTNAPPVVSS QEVAATQTAL VPEQQPSRDI EGDEPNANLE SGNDTEELKL
101: EEAATKVQAV VRSHQAREEF QKLKCIIKVQ AVIRGHLVRR QAVATYSCIW GIVKLQALVR GKNARSSETG VQLQKTNAET ESSETLQVTN TCSWLGNPTK
201: LSMIDKLLVS SPTVLPLKIQ YSPEDPNSAN VWLERWTQLQ VWAPGPLVVK SLVPKSQTKK RSFQAVEADK GKLKGGIKKP PGGLNTGTSS SSRSIAENEK
301: PKRTVRKPST LGKELNENKS KQSSRKSTSA IKEGSSLEVK DEKPRTSLKK ASVSNGVEKP ARKSAEKKKK EIVDSVQKES PVDKVSASVV DTPEEGEEKV
401: KDSPETVSKE ADLDKDENVL VLDKPEKDEL KTAERNDKAE EEIQEPDVLI ISSENGNAVS EDTKTSDRRA SLPAKIESQQ QDDGLTTQSG RKIPSYMAPT
501: ASAKARVRGG QGSPRIGGQE KPEKNGTTRR HSLPHIANDK LSAMSPRVHR LLIASAKGSI NSDRSFSSSK DIGDKSTKAE WKR
Best Arabidopsis Sequence Match ( AT2G02790.3 )
(BLAST)
001: MGKTPSPGKW IKSLLGKKSS KSSLEKGGEK LRSAKKEELV VKVKDNNVSK LPTEPPVVSS QEVAATQTVV VPDVVIAEKQ LSGDIEGDES SNVNLESGND
101: SEEVKLEEAA TKVQAALRAQ QAREESQNLK GITRVQAVIR GHLVRRQAVA TYSCIWGIVK VQALVRGKKA RSSETVAQLQ KTNTETETSE TLQGSTYSWM
201: ENPTKLSMID KLLVSSPTTL PLKIQYSPED PNSAKVWLGR WTQLQVWAPG PLVVKNLVPK SQTKKRSFQA VEAEKGKLKR GVRKPTGVST TANSSTSRST
301: ADNEKPKRTV RKASTLGKEL SKIENDKSKQ SSRKSTSAIK EGSSVEVKDE KPRISHKKAS LSNGIGKATR KSAEKKKEIA DAVQKELPIE EVSVSLVDAP
401: EDEKMNLIPV TISKESDLDK DEKSLVLDKP EQDELRTAER DDKAEEELKT AERDDSAEEK IQEPDAQISS ENGNVASENT KPSDRRASLP AKIENHHQDD
501: GLTQSGRKIP SYMAPTASAK ARIRGQGSPR IAQEKPEKNG TTRRHSLPPA ANGKLSTMSP RAHRLLIASA KGSMNSDRSF SSSKDIGDKS TKAEWKR
Arabidopsis Description
IQD29IQ-domain 29 [Source:UniProtKB/TrEMBL;Acc:F4IRA9]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.