Factsheet for GSMUA_Achr5P13660_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, cytosol

Predictor Summary:

nucleus 2
mitochondrion 4
cytosol 2
peroxisome 1
plastid 2
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
GSMUA_Achr10P...
GSMUA_Achr2P09630_001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G62070.1	GSMUA_Achr10P...	AT3G27960.1	21798944
AT5G62070.1	GSMUA_Achr2P09630_001	AT3G27960.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr3P18210_001	Banana	cytosol, mitochondrion	70.32	71.79
GSMUA_Achr8P11920_001	Banana	cytosol	51.6	62.95
GSMUA_Achr5P20090_001	Banana	cytosol, mitochondrion	61.87	59.04
EES12687	Sorghum	cytosol, mitochondrion	60.73	56.96
Zm00001d002630_P002	Maize	mitochondrion	58.68	56.24
TraesCS2B01G418900.1	Wheat	cytosol, mitochondrion	58.22	55.43
Os04t0569900-01	Rice	cytosol, mitochondrion	58.22	54.96
TraesCS2D01G398300.1	Wheat	cytosol, mitochondrion	57.53	54.55
HORVU0Hr1G005320.2	Barley	cytosol	44.75	53.85
GSMUA_Achr11P...	Banana	cytosol, mitochondrion	50.68	52.48
Zm00001d026084_P001	Maize	mitochondrion	58.68	51.81
VIT_02s0025g04120.t01	Wine grape	mitochondrion	52.74	46.76
Solyc08g007920.1.1	Tomato	cytosol	22.37	41.88
CDX70019	Canola	cytosol, mitochondrion	33.56	41.53
Bra009281.1-P	Field mustard	mitochondrion	33.56	41.53
Solyc08g080470.2.1	Tomato	plastid	47.26	41.48
Bra005929.1-P	Field mustard	plastid	32.42	41.4
CDX78285	Canola	plastid	32.42	41.28
CDX98994	Canola	mitochondrion	33.33	41.24
Solyc08g007930.1.1	Tomato	cytosol	21.23	40.97
PGSC0003DMT400007855	Potato	cytosol, plastid	46.35	40.6
KRH57246	Soybean	cytosol	40.87	40.22
KRH03972	Soybean	cytosol	40.87	40.04
AT5G62070.1	Thale cress	cytosol, plastid	36.76	39.95
KRH09113	Soybean	cytosol	42.92	39.41
GSMUA_Achr4P21190_001	Banana	cytosol	18.04	39.3
KRH77498	Soybean	cytosol, mitochondrion	35.16	38.89
CDY00253	Canola	plastid	34.93	38.83
CDX86928	Canola	mitochondrion, plastid	34.93	38.83
KRH38565	Soybean	cytosol	42.24	38.38
Bra010055.1-P	Field mustard	plastid	35.16	38.02
KRG91452	Soybean	cytosol	39.04	37.5
CDY00251	Canola	plastid	35.16	37.47
CDX81042	Canola	plastid	32.88	37.21
KRH35361	Soybean	cytosol, mitochondrion	39.04	36.85
CDY41368	Canola	mitochondrion, plastid	35.16	36.67
Bra020822.1-P	Field mustard	mitochondrion, plastid	34.7	36.19
CDX76341	Canola	mitochondrion, plastid	34.7	36.19
AT4G23060.1	Thale cress	mitochondrion, nucleus	39.95	36.16
CDX98786	Canola	nucleus	39.04	36.0
Bra013672.1-P	Field mustard	mitochondrion, nucleus	40.64	35.89
CDY53133	Canola	nucleus	39.73	35.8
CDX94150	Canola	nucleus	37.9	35.78
CDY41252	Canola	cytosol, mitochondrion	39.73	35.66
VIT_16s0100g00620.t01	Wine grape	cytosol	26.71	35.14
Bra019337.1-P	Field mustard	nucleus	37.67	35.03
CDX98787	Canola	mitochondrion	23.52	34.8
PGSC0003DMT400014796	Potato	cytosol	28.54	34.72
GSMUA_Achr3P14930_001	Banana	cytosol	29.68	34.3
GSMUA_Achr8P26800_001	Banana	cytosol	29.22	34.22
Solyc03g026110.2.1	Tomato	cytosol, mitochondrion	37.9	34.16
AT5G07240.2	Thale cress	plastid	34.7	34.0
PGSC0003DMT400037043	Potato	mitochondrion, nucleus	36.3	33.4
GSMUA_Achr10P...	Banana	cytosol, mitochondrion	27.85	33.06
GSMUA_AchrUn_...	Banana	cytosol	28.54	32.98
GSMUA_Achr1P02670_001	Banana	mitochondrion	10.73	32.87
GSMUA_Achr7P13670_001	Banana	cytosol, mitochondrion	28.08	32.63
GSMUA_Achr10P...	Banana	cytosol	32.65	32.43
GSMUA_Achr6P14870_001	Banana	cytosol, mitochondrion	27.17	31.73
GSMUA_Achr6P26400_001	Banana	cytosol, mitochondrion	28.08	30.98
GSMUA_Achr8P27610_001	Banana	cytosol, mitochondrion	23.74	30.68
GSMUA_Achr5P06520_001	Banana	cytosol, mitochondrion	28.31	30.54
GSMUA_Achr3P17570_001	Banana	cytosol, mitochondrion	28.08	30.45
GSMUA_Achr9P06040_001	Banana	cytosol	26.48	30.21
GSMUA_Achr8P20170_001	Banana	cytosol, mitochondrion	26.71	29.25
GSMUA_Achr11P...	Banana	mitochondrion	13.24	29.15
GSMUA_Achr3P17450_001	Banana	nucleus	27.17	26.5
GSMUA_Achr1P19900_001	Banana	cytosol	12.79	24.03
GSMUA_Achr4P30750_001	Banana	mitochondrion	12.1	19.78
GSMUA_Achr8P19690_001	Banana	mitochondrion	12.33	19.64
GSMUA_Achr8P26180_001	Banana	mitochondrion	21.23	17.71
GSMUA_Achr4P30780_001	Banana	cytosol, mitochondrion	20.09	15.88
GSMUA_Achr2P15790_001	Banana	cytosol	20.78	15.88
GSMUA_AchrUn_...	Banana	mitochondrion	18.26	15.81
GSMUA_Achr2P00850_001	Banana	nucleus, plastid	3.2	15.56
GSMUA_Achr1P06080_001	Banana	nucleus	23.06	12.97
GSMUA_Achr3P11240_001	Banana	nucleus	22.15	12.42
GSMUA_Achr7P06540_001	Banana	endoplasmic reticulum, plasma membrane	23.29	12.06
GSMUA_Achr1P19910_001	Banana	nucleus	10.96	8.03

Protein Annotations

EnsemblPlants:GSMUA_Achr5P13660_001	EnsemblPlants:GSMUA_Achr5T13660_001	EnsemblPlantsGene:GSMUA_Achr5G13660_001	Gene3D:1.20.5.190	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	InterPro:DUF4005	InterPro:IPR000048	InterPro:IQ_motif_EF-hand-BS	PANTHER:PTHR32295	PANTHER:PTHR32295:SF52
PFAM:PF00612	PFAM:PF13178	PFscan:PS50096	SEG:seg	SMART:SM00015	UniParc:UPI0002952DEF
UniProt:M0SY95	MapMan:35.2	:	:	:	:

Description

IQ calmodulin-binding motif family protein, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr5G13660_001]

Coordinates

chr5:-:9838697..9840822

Molecular Weight (calculated)

48260.8 Da

IEP (calculated)

10.753

GRAVY (calculated)

-0.744

Length

438 amino acids

Sequence
(BLAST)

001: MGRTTRWLRR LFGGKKADPG GYPAEGRPAK DKRRWGFVMP FREKGSNHQH RRWQHTAAAV TEERKYREAD EEEQNKRAIA VAAATAAVAE AAVAAAQAAA
101: AVVRLTSSGR AAVGFTPAAA SKREEKAAIK IQAAFRGYLA RKALKALKGL VKLQALVRGN IVRKQAAETL RCMQALVRVQ ARARACRVLR SERSKFEKAP
201: GEGHAVSVDL RTVWRPASGD RDRANTAGWN WLDQWVEERY WDDPESARKT GAGVSVDDEK NAKILEVDPG KPQYHHKRRN TYVHSSSSTL TSDQNSYSFV
301: TLPGSPSMES TGAQRSFPGQ QSMVHLMLPF EAGEYGESPQ FCSASSRPGS SRKGPFTPSK SECSQSLCCG YSDHPNYMAN TESSKAKVRS HSAPKQRPDR
401: HDPWAPLAQR SSSLHANFSI KAYPGSGRLD RSGMPVRI

Best Arabidopsis Sequence Match ( AT4G23060.1 )
(BLAST)

001: MGKASRWFRS LFGVKKPDPG YPDLSVETPS RSTSSNLKRR WSFVKSKREK ESTPINQVPH TPSLPNSTPP PPSHHQSSPR RRRKQKPMWE DEGSEDSDKH
101: AIAVAAATAA VAEAAVAAAN AAAAVVRLTS TSGRSTRSPV KARFSDGFDD VVAHGSKFYG HGRDSCELAV IKIQSIFRGY LAKRALRALK GLVRLQAIVR
201: GHIERKRMSV HLRRMHALVR AQARVRATRV IVTPESSSSQ SNNTKSSHFQ NPGPPTPEKL EHSISSRSSK LAHSHLFKRN GSKASDNNRL YPAHRETFSA
301: TDEEEKILQI DRKHISSYTR RNRPDMFYSS HLILDNAGLS EPVFATPFSP SSSHEEITSQ FCTAENSPQL YSATSRSKRS AFTASSIAPS DCTKSCCDGD
401: HPSYMACTES SRAKARSASA PKSRPQLFYE RPSSKRFGFV DLPYCGDTKS GPQKGSALHT SFMNKAYPGS GRLDRLGMPI GYRY

Arabidopsis Description

IQD22Calmodulin binding protein IQD22 [Source:UniProtKB/TrEMBL;Acc:Q2NNE0]
SUBAcon: [mitochondrion,nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.