Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr10P... | Banana | cytosol | 65.03 | 70.45 |
| EES05647 | Sorghum | cytosol | 69.09 | 69.28 |
| Zm00001d051589_P001 | Maize | cytosol | 68.67 | 68.86 |
| Os02t0708400-01 | Rice | plasma membrane | 68.39 | 68.78 |
| Zm00001d017793_P001 | Maize | cytosol | 67.55 | 67.74 |
| HORVU6Hr1G069310.1 | Barley | cytosol | 66.85 | 67.51 |
| TraesCS6A01G274500.1 | Wheat | cytosol | 66.43 | 67.0 |
| TraesCS6B01G302000.1 | Wheat | cytosol | 66.43 | 66.9 |
| TraesCS6D01G254800.1 | Wheat | cytosol | 66.43 | 66.9 |
| VIT_17s0000g08260.t01 | Wine grape | cytosol | 65.17 | 63.14 |
| PGSC0003DMT400062960 | Potato | cytosol | 63.92 | 62.6 |
| Solyc03g114320.2.1 | Tomato | cytosol | 63.64 | 62.33 |
| VIT_14s0066g01280.t01 | Wine grape | cytosol | 57.2 | 61.04 |
| KRH63534 | Soybean | nucleus | 60.42 | 59.5 |
| KRH56614 | Soybean | cytosol | 58.32 | 59.4 |
| KRG93305 | Soybean | cytosol | 57.76 | 59.0 |
| GSMUA_Achr10P... | Banana | cytosol | 47.13 | 57.71 |
| KRH54405 | Soybean | cytosol | 59.72 | 56.71 |
| Bra025315.1-P | Field mustard | cytosol | 51.75 | 55.72 |
| CDX86457 | Canola | cytosol | 51.75 | 55.72 |
| CDY58518 | Canola | cytosol | 51.05 | 55.56 |
| AT3G27960.1 | Thale cress | cytosol | 51.47 | 55.51 |
| Solyc02g086840.2.1 | Tomato | cytosol | 54.69 | 54.99 |
| PGSC0003DMT400001405 | Potato | cytosol | 54.97 | 54.89 |
| CDY27619 | Canola | nucleus | 50.49 | 54.78 |
| Bra032832.1-P | Field mustard | nucleus | 50.49 | 54.78 |
| AT1G27500.2 | Thale cress | cytosol | 50.63 | 54.77 |
| KRH57064 | Soybean | cytosol | 53.01 | 51.92 |
| CDY56191 | Canola | cytosol | 51.33 | 51.54 |
| CDX90092 | Canola | cytosol, mitochondrion | 8.81 | 50.4 |
| KRH03299 | Soybean | cytosol | 26.85 | 48.12 |
| GSMUA_Achr5P17290_001 | Banana | plastid | 16.22 | 23.2 |
| GSMUA_Achr9P23570_001 | Banana | mitochondrion | 20.28 | 22.24 |
Protein Annotations
| Gene3D:1.25.40.10 | MapMan:21.1.1.4.3 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0016787 | EnsemblPlantsGene:GSMUA_Achr2G09630_001 | EnsemblPlants:GSMUA_Achr2P09630_001 | EnsemblPlants:GSMUA_Achr2T09630_001 | InterPro:IPR011990 |
| InterPro:IPR013026 | InterPro:IPR019734 | UniProt:M0S6K4 | PFAM:PF13374 | PFAM:PF13424 | PFscan:PS50005 |
| PFscan:PS50293 | PANTHER:PTHR19959 | PANTHER:PTHR19959:SF156 | SMART:SM00028 | SUPFAM:SSF48452 | InterPro:TPR-contain_dom |
| InterPro:TPR-like_helical_dom_sf | InterPro:TPR_repeat | UniParc:UPI000296698B | SEG:seg | : | : |
Description
tetratricopeptide repeat domain containing protein, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr2G09630_001]
Coordinates
chr2:+:13091210..13093693
Molecular Weight (calculated)
78060.4 Da
IEP (calculated)
5.569
GRAVY (calculated)
-0.407
Length
715 amino acids
Sequence
(BLAST)
(BLAST)
001: MPGIVMDGVG TNVTPNGLNS SDIKENQTAS RSPISPSLKS APSEALELVL DGCKDLSIEQ LYHNVCEMES SSNESLSQQS FGSDGEESRI DSELCHLAGG
101: EGDSVKSINQ REENGMAAQK QENTSKTQSP NISSKKSRRP PGLRLKSDAS MNSSTRAKSS PEKDDKSVAK LGSAVGRLKK QNKYPRGEPN WENGTQDPSE
201: AGLENPDLGP FLLKHARDLI ASNNAKRALK YALRAANSFE KCAGGMPSLD LVMSLHVVAA IYCNLGQYAE AVPVLHRSIE IPALEEGLEH ALAKFSGYML
301: LGDTYAMLGH LGSSLQCYTE GLAIQSRALG DMDPRVGETC RYVAEAHVQA LQFDEAERLC RKALDIHREK GETASLEEAA DRRLMALICD AKGDHEAALE
401: HLVSVSMALV ANGQETEVAS VDCSIGDIYL TLGRYEEAVF AYRKSLTVFK ATKGENHPTV ASVFVRLADL YNRIGKFRES KSHCENALRI YGKPIPGVSS
501: EEVAAGLTNV SSIFESMNEH EQALKLLQKA SKMYSNSPGH QNTIAGIEAQ MGVLHYIRGD YDESYISFKN AITKLRACGE KKSAFFGVAL NQMGLVCVQR
601: FAIIEAAELF EEARSILEQE YGPFHPDTLG VYSNLAGTYD AMGRLDEAIE ILEYVVGIRE ENLGTANPEV DDEKRRLAEL LKEAGRVRNR KPRSLETLLD
701: KNPHAMNKNT VTAVV
101: EGDSVKSINQ REENGMAAQK QENTSKTQSP NISSKKSRRP PGLRLKSDAS MNSSTRAKSS PEKDDKSVAK LGSAVGRLKK QNKYPRGEPN WENGTQDPSE
201: AGLENPDLGP FLLKHARDLI ASNNAKRALK YALRAANSFE KCAGGMPSLD LVMSLHVVAA IYCNLGQYAE AVPVLHRSIE IPALEEGLEH ALAKFSGYML
301: LGDTYAMLGH LGSSLQCYTE GLAIQSRALG DMDPRVGETC RYVAEAHVQA LQFDEAERLC RKALDIHREK GETASLEEAA DRRLMALICD AKGDHEAALE
401: HLVSVSMALV ANGQETEVAS VDCSIGDIYL TLGRYEEAVF AYRKSLTVFK ATKGENHPTV ASVFVRLADL YNRIGKFRES KSHCENALRI YGKPIPGVSS
501: EEVAAGLTNV SSIFESMNEH EQALKLLQKA SKMYSNSPGH QNTIAGIEAQ MGVLHYIRGD YDESYISFKN AITKLRACGE KKSAFFGVAL NQMGLVCVQR
601: FAIIEAAELF EEARSILEQE YGPFHPDTLG VYSNLAGTYD AMGRLDEAIE ILEYVVGIRE ENLGTANPEV DDEKRRLAEL LKEAGRVRNR KPRSLETLLD
701: KNPHAMNKNT VTAVV
001: MDVGESNERV KDDSALQASP RSPLSSIDLA IDGAMNASIE QLYHNVCEME SSDDQSPSRA SFISYGAESR IDLELRHLVG DVGEEGESKK EIILEKKEES
101: NGEGSLSQKK PLSNGKKVAK TSPNNPKMPG SRISSRKSPD LGKVSVDEES PELGVVLLKQ ARELVSSGEN LNKALDLALR AVKVFEKCGE GEKQLGLNLV
201: MSLHILAAIY AGLGRYNDAV PVLERSIEIP MIEDGEDHAL AKFAGCMQLG DMYGLMGQVE NSIMLYTAGL EIQRQVLGES DARVGETCRY LAEAHVQAMQ
301: FEEASRLCQM ALDIHKENGA AATASIEEAA DRKLMGLICD AKGDYEVALE HYVLASMAMS SQNHREDVAA VDCSIGDAYM SLARFDEAIF AYQKALAVFK
401: QGKGETHSSV ALVYVRLADL YNKIGKTRDS KSYCENALKI YLKPTPGTPM EEVATGFIEI SAIYQSMNEL DQALKLLRRA LKIYANAPGQ QNTIAGIEAQ
501: MGVVTYMMGN YSESYDIFKS AISKFRNSGE KKTALFGIAL NQMGLACVQR YAINEAADLF EEAKTILEKE CGPYHPDTLA VYSNLAGTYD AMGRLDDAIE
601: ILEYVVGTRE EKLGTANPEV EDEKQRLAAL LKEAGRGRSK RNRALLTLLD NNPEIANGQR PVY
101: NGEGSLSQKK PLSNGKKVAK TSPNNPKMPG SRISSRKSPD LGKVSVDEES PELGVVLLKQ ARELVSSGEN LNKALDLALR AVKVFEKCGE GEKQLGLNLV
201: MSLHILAAIY AGLGRYNDAV PVLERSIEIP MIEDGEDHAL AKFAGCMQLG DMYGLMGQVE NSIMLYTAGL EIQRQVLGES DARVGETCRY LAEAHVQAMQ
301: FEEASRLCQM ALDIHKENGA AATASIEEAA DRKLMGLICD AKGDYEVALE HYVLASMAMS SQNHREDVAA VDCSIGDAYM SLARFDEAIF AYQKALAVFK
401: QGKGETHSSV ALVYVRLADL YNKIGKTRDS KSYCENALKI YLKPTPGTPM EEVATGFIEI SAIYQSMNEL DQALKLLRRA LKIYANAPGQ QNTIAGIEAQ
501: MGVVTYMMGN YSESYDIFKS AISKFRNSGE KKTALFGIAL NQMGLACVQR YAINEAADLF EEAKTILEKE CGPYHPDTLA VYSNLAGTYD AMGRLDDAIE
601: ILEYVVGTRE EKLGTANPEV EDEKQRLAAL LKEAGRGRSK RNRALLTLLD NNPEIANGQR PVY
Arabidopsis Description
KLCR2Protein KINESIN LIGHT CHAIN-RELATED 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9LII8]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.