Factsheet for Bra025315.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra000434.1-P
Bra001412.1-P
Bra001492.1-P
Bra002404.1-P
Bra003236.1-P
Bra003403.1-P
Bra004501.1-P
Bra006620.1-P
Bra007234.1-P
Bra007514.1-P
Bra008305.1-P
Bra008613.1-P
Bra010082.1-P
Bra010809.1-P
Bra011306.1-P
Bra011350.1-P
Bra011921.1-P
Bra014219.1-P
Bra014506.1-P
Bra015670.1-P
Bra016480.1-P
Bra016652.1-P
Bra018876.1-P
Bra021487.1-P
Bra023570.1-P
Bra024367.1-P
Bra028552.1-P
Bra029261.1-P
Bra029651.1-P
Bra030468.1-P
Bra031870.1-P
Bra032338.1-P
Bra034827.1-P
Bra035662.1-P
Bra036122.1-P
Bra038549.1-P
Bra038816.1-P
Bra039138.1-P
Bra039373.1-P
Bra039453.1-P
Bra040478.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G27960.1	Bra016652.1-P	AT1G15700.1	21798944
AT3G27960.1	Bra010809.1-P	AT1G29810.1	21798944
AT3G27960.1	Bra032338.1-P	AT1G29810.1	21798944
AT3G27960.1	Bra014219.1-P	AT1G49840.1	21798944
AT3G27960.1	Bra018876.1-P	AT1G50900.1	21798944
AT3G27960.1	Bra030468.1-P	AT1G50900.1	21798944
AT3G27960.1	Bra036122.1-P	AT1G54770.1	21798944
AT3G27960.1	Bra008305.1-P	AT1G77400.1	21798944
AT3G27960.1	Bra015670.1-P	AT1G77400.1	21798944
AT3G27960.1	Bra038549.1-P	AT2G18730.1	21798944
AT3G27960.1	Bra038816.1-P	AT2G18730.1	21798944
AT3G27960.1	Bra011921.1-P	AT2G28880.1	21798944
AT3G27960.1	Bra035662.1-P	AT2G28880.1	21798944
AT3G27960.1	Bra000434.1-P	AT2G46870.1	21798944
AT3G27960.1	Bra004501.1-P	AT2G46870.1	21798944
AT3G27960.1	Bra040478.1-P	AT2G46870.1	21798944
AT3G27960.1	Bra021487.1-P	AT3G01180.1	21798944
AT3G27960.1	Bra039138.1-P	AT3G01180.1	21798944
AT3G27960.1	Bra039453.1-P	AT3G05210.1	21798944
AT3G27960.1	Bra016480.1-P	AT3G07480.1	21798944
AT3G27960.1	Bra029651.1-P	AT3G07480.1	21798944
AT3G27960.1	Bra001412.1-P	AT3G11590.1	21798944
AT3G27960.1	Bra034827.1-P	AT3G11590.1	21798944
AT3G27960.1	Bra001492.1-P	AT3G13160.1	21798944
AT3G27960.1	Bra039373.1-P	AT3G13160.1	21798944
AT3G27960.1	Bra003236.1-P	AT3G56290.1	21798944
AT3G27960.1	Bra007234.1-P	AT3G56290.1	21798944
AT3G27960.1	Bra003403.1-P	AT3G60200.1	21798944
AT3G27960.1	Bra007514.1-P	AT3G60200.1	21798944
AT3G27960.1	Bra014506.1-P	AT3G60200.1	21798944
AT3G27960.1	Bra011306.1-P	AT4G31875.1	21798944
AT3G27960.1	Bra011350.1-P	AT4G32470.1	21798944
AT3G27960.1	Bra028552.1-P	AT5G11090.1	21798944
AT3G27960.1	Bra008613.1-P	AT5G16560.1	21798944
AT3G27960.1	Bra023570.1-P	AT5G16560.1	21798944
AT3G27960.1	Bra002404.1-P	AT5G22310.1	21798944
AT3G27960.1	Bra006620.1-P	AT5G22310.1	21798944
AT3G27960.1	Bra010082.1-P	AT5G62430.1	21798944
AT3G27960.1	Bra029261.1-P	AT5G62430.1	21798944
AT3G27960.1	Bra024367.1-P	AT5G65220.1	21798944
AT3G27960.1	Bra031870.1-P	AT5G65220.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX86457	Canola	cytosol	100.0	100.0
AT3G27960.1	Thale cress	cytosol	84.04	84.16
VIT_14s0066g01280.t01	Wine grape	cytosol	62.2	61.64
KRG93305	Soybean	cytosol	63.55	60.29
KRH56614	Soybean	cytosol	63.7	60.26
GSMUA_Achr10P...	Banana	cytosol	55.72	56.06
Solyc02g086840.2.1	Tomato	cytosol	59.64	55.7
Os02t0708400-01	Rice	plasma membrane	59.64	55.7
EES05647	Sorghum	cytosol	59.19	55.12
PGSC0003DMT400001405	Potato	cytosol	59.19	54.89
Zm00001d051589_P001	Maize	cytosol	58.73	54.7
HORVU6Hr1G069310.1	Barley	cytosol	58.13	54.52
TraesCS6A01G274500.1	Wheat	cytosol	58.13	54.44
TraesCS6B01G302000.1	Wheat	cytosol	58.13	54.37
TraesCS6D01G254800.1	Wheat	cytosol	57.83	54.08
Zm00001d017793_P001	Maize	cytosol	57.53	53.58
Bra000724.1-P	Field mustard	plastid	47.44	51.81
GSMUA_Achr2P09630_001	Banana	nucleus	55.72	51.75
Bra032832.1-P	Field mustard	nucleus	49.85	50.23
Bra021713.1-P	Field mustard	cytosol	18.52	23.98

Protein Annotations

Gene3D:1.25.40.10	MapMan:21.1.1.4.3	EnsemblPlantsGene:Bra025315	EnsemblPlants:Bra025315.1	EnsemblPlants:Bra025315.1-P	ncoils:Coil
GO:GO:0000003	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005623
GO:GO:0005886	GO:GO:0006950	GO:GO:0008150	GO:GO:0009653	GO:GO:0009856	GO:GO:0009860
GO:GO:0009987	GO:GO:0016020	GO:GO:0016043	GO:GO:0016049	GO:GO:0030154	GO:GO:0031347
GO:GO:0040007	InterPro:IPR011990	InterPro:IPR013026	InterPro:IPR019734	UniProt:M4E959	PFAM:PF13374
PFAM:PF13424	PFscan:PS50005	PFscan:PS50293	PANTHER:PTHR19959	PANTHER:PTHR19959:SF160	SMART:SM00028
SUPFAM:SSF48452	InterPro:TPR-contain_dom	InterPro:TPR-like_helical_dom_sf	InterPro:TPR_repeat	UniParc:UPI000253FC29	SEG:seg

Description

AT3G27960 (E=0.0) | kinesin light chain-related

Coordinates

chrA06:+:22234375..22236453

Molecular Weight (calculated)

73170.1 Da

IEP (calculated)

4.979

GRAVY (calculated)

-0.399

Length

664 amino acids

Sequence
(BLAST)

001: MEIGESHDRG KDDSAAVQAS PRSPLSSIDL AMDGAMNASI EQLYHNVCEM ESSDDQSPSR ASFISYGAES RIDLELRHLV GGDVGERKKD VVLEKKEESN
101: KESKNREGSL SHKKPEKLAK TSPNSKIPGS RISSRKSPDL RKVSVDEESP ELGPLLLKQA REMVSSGENL NKALDLALRA VKAFEKRAEG ETQQGLNLVM
201: SLHILAAIYA GLGKYNEAVP VLERSIEIPM IEDGEDHSLA KFAGCMQLGD MYGLMGQVEN SLLLYTAGLE IQRQVLGETD PRVGETCRYL AEAHVQAMQF
301: EEASRLCQMA LDIHKENGST ATASIEEAAD RKLMGLICDA KGDYEVALEH YVLASMAMSS QNHREDVASI DCSIGDAYMS LARFDESIFA YQKALAVFKQ
401: SKGESHSSVA SVYVRLADLY NKIGKLRDSK SYCENALRIY LKPSPGTPME EVATGFVEIS AIYQSMNELD QALKLLRRAL KIYVNAPGQQ NTVAGIEAQM
501: GVISYMMGNY PESYNIFKSA VSKFRNSGEK KTAMFGIALN QMGLACVQRY AINEAADLFE EAKGILENEY GPYHPDTLAV YSNLAGTYDA MGRLEDAIEI
601: LEYVVGTREE KLGTANPEVE DEKQRLAALL KEAGRGRIKR NRALLTLLDK NPEIEPNCGQ RPVY

Best Arabidopsis Sequence Match ( AT3G27960.3 )
(BLAST)

001: MDVGESNERV KDDSALQASP RSPLSSIDLA IDGAMNASIE QLYHNVCEME SSDDQSPSRA SFISYGAESR IDLELRHLVG DVGEEGESKK EIILEKKEES
101: NGEGSLSQKK PLSNGKKVAK TSPNNPKMPG SRISSRKSPD LGKVSVDEES PELGVVLLKQ ARELVSSGEN LNKALDLALR AVKVFEKCGE GEKQLGLNLV
201: MSLHILAAIY AGLGRYNDAV PVLERSIEIP MIEDGEDHAL AKFAGCMQLG DMYGLMGQVE NSIMLYTAGL EIQRQVLGES DARVGETCRY LAEAHVQAMQ
301: FEEASRLCQM ALDIHKENGA AATASIEEAA DRKLMGLICD AKGDYEVALE HYVLASMAMS SQNHREDVAA VDCSIGDAYM SLARFDEAIF AYQKALAVFK
401: QGKGETHSSV ALVYVRLADL YNKIGKTRDS KSYCENALKI YLKPTPGTPM EEVATGFIEI SAIYQSMNEL DQALKLLRRA LKIYANAPGQ QNTIAGIEAQ
501: MGVVTYMMGN YSESYDIFKS AISKFRNSGE KKTALFGIAL NQMGLACVQR YAINEAADLF EEAKTILEKE CGPYHPDTLA VYSNLAGTYD AMGRLDDAIE
601: ILEYVVGTRE EKLGTANPEV EDEKQRLAAL LKEAGRGRSK RNRALLTLLD NNPEIANGQR PVY

Arabidopsis Description

KLCR2Protein KINESIN LIGHT CHAIN-RELATED 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9LII8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.