Factsheet for Bra016652.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 11

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX96834	Canola	plastid	98.94	98.94
AT1G15700.1	Thale cress	plastid	84.43	82.9
VIT_19s0090g00480.t01	Wine grape	mitochondrion	56.73	69.81
KRH46189	Soybean	plastid	58.84	65.2
PGSC0003DMT400071659	Potato	plastid	61.48	64.36
Bra029511.1-P	Field mustard	plastid	63.32	64.0
Bra000802.1-P	Field mustard	plastid	63.06	63.9
Solyc12g005060.1.1	Tomato	plastid	56.73	61.6
Bra018503.1-P	Field mustard	plastid	60.69	45.63
Bra021826.1-P	Field mustard	mitochondrion	25.07	29.59
Bra005531.1-P	Field mustard	mitochondrion	24.8	28.92
Bra022908.1-P	Field mustard	mitochondrion	24.8	28.92
Bra015765.1-P	Field mustard	nucleus	12.93	9.68
Os07t0513100-01	Rice	mitochondrion, nucleus	10.55	4.05

Protein Annotations

MapMan:1.1.9.2.3	InterPro:ATP_synth_F1_ATPase_gsu	InterPro:ATP_synth_F1_gsu	InterPro:ATP_synth_F1_gsu_CS	EnsemblPlantsGene:Bra016652	EnsemblPlants:Bra016652.1
EnsemblPlants:Bra016652.1-P	GO:GO:0003674	GO:GO:0003824	GO:GO:0005215	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0006139	GO:GO:0006810	GO:GO:0007275	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009507	GO:GO:0009536	GO:GO:0009653	GO:GO:0009987
GO:GO:0015986	GO:GO:0016020	GO:GO:0016787	GO:GO:0045261	GO:GO:0046933	GO:GO:0099132
GO:GO:2000067	UniProt:M4DJH4	HAMAP:MF_00815	PFAM:PF00231	PRINTS:PR00126	ScanProsite:PS00153
PANTHER:PTHR11693	PANTHER:PTHR11693:SF23	SUPFAM:SSF52943	TIGRFAMs:TIGR01146	UniParc:UPI00025458A0	SEG:seg

Description

AT1G15700 (E=7e-150) ATPC2 | ATPC2; enzyme regulator

Coordinates

chrA08:+:19432366..19433505

Molecular Weight (calculated)

41658.3 Da

IEP (calculated)

7.708

GRAVY (calculated)

-0.160

Length

379 amino acids

Sequence
(BLAST)

001: MTGSISTSWL LSSPTNSKPL STSKSITFLP TLNPRLSPDR FPSRSPSPSL QIRAGIRELR ERIDTVKNTQ KITEAMKLVA AARVRRAQEA VINCRPFTEA
101: LVGILHSINQ CAQSEDVDFP LSNVRPVKRV ALVVVTGDKG LCGGFNNAVI KKANSRVDEL KQRGIECVVV SVGKKGNAYF SRRDDVEVDK CIQGGGVYPT
201: AKEAQVIADD VFSLFVSEEV DKVELVYTKF VSLVKSDPVI HTLLPLTLKG ESCDVEGVCV DAMEDEMFRL TSKDGKLSVE RRKVEVERPE ISPLMQFEQD
301: PVQILDAMMP LYLNSQILRA LQESLASELA SRMSAMSNAT DNAVELKKSL TVAYNRERQA KITGELLEIV AGAEALRGT

Best Arabidopsis Sequence Match ( AT1G15700.1 )
(BLAST)

001: MTGSISTSWL LSSPSNSNSA SSSESYSFIA TLKPVRYYPF QSLTPNRISS RSPLPSIQIR AGIRELRERI DSVKNTQKIT EAMRLVAAAR VRRAQDAVIK
101: GRPFTETLVE ILYSINQSAQ LEDIDFPLSI VRPVKRVALV VVTGDKGLCG GFNNAVTKKA TLRVQELKQR GIDCVVISVG KKGNAYFSRR DEFDVDKCIE
201: GGGVFPTTKE AQVIADDVFS LFVSEEVDKV ELVYTKFVSL VKSDPVIHTL LPLSMKGESC DVKGECVDAI EDEMFRLTSK DGKLAVERTK LEVEKPEISP
301: LMQFEQDPVQ ILDAMMPLYL NSQILRALQE SLASELASRM NAMSNATDNA VELKKNLTMA YNRARQAKIT GELLEIVAGA EALRES

Arabidopsis Description

ATPC2ATP synthase gamma chain 2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q01909]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.