Factsheet for Bra015765.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
mitochondrion 2
plastid 1
vacuole 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX88259	Canola	nucleus	45.65	53.35
CDY72042	Canola	cytosol	42.69	50.59
HORVU7Hr1G085110.1	Barley	cytosol	16.01	39.13
Bra021826.1-P	Field mustard	mitochondrion	23.12	36.45
Bra005531.1-P	Field mustard	mitochondrion	23.32	36.31
Bra022908.1-P	Field mustard	mitochondrion	23.32	36.31
KRH63239	Soybean	mitochondrion	21.34	33.75
GSMUA_Achr9P07120_001	Banana	mitochondrion	21.54	33.75
KRH54686	Soybean	mitochondrion	21.54	33.64
VIT_17s0000g07300.t01	Wine grape	mitochondrion	20.95	32.92
Os10t0320400-01	Rice	mitochondrion	20.95	32.72
TraesCS1D01G132700.1	Wheat	golgi, unclear	20.95	32.52
TraesCS1A01G138800.1	Wheat	golgi, unclear	20.95	32.52
TraesCS1B01G148500.1	Wheat	mitochondrion	20.95	32.52
EER95278	Sorghum	mitochondrion	20.95	32.12
Solyc03g115110.2.1	Tomato	plastid	20.16	31.48
PGSC0003DMT400063336	Potato	mitochondrion	19.96	31.17
Bra000802.1-P	Field mustard	plastid	10.28	13.9
Bra029511.1-P	Field mustard	plastid	10.28	13.87
Bra016652.1-P	Field mustard	plastid	9.68	12.93
Bra018503.1-P	Field mustard	plastid	10.28	10.32
Zm00001d044380_P001	Maize	cytosol	2.57	7.88
Zm00001d010316_P001	Maize	cytosol	0.59	4.0

Protein Annotations

Gene3D:3.40.1380.10	Gene3D:3.90.70.10	MapMan:35.1	InterPro:ATP_synth_F1_ATPase_gsu	InterPro:ATP_synth_F1_gsu	EnsemblPlantsGene:Bra015765
EnsemblPlants:Bra015765.1	EnsemblPlants:Bra015765.1-P	GO:GO:0003674	GO:GO:0003824	GO:GO:0005215	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0006139	GO:GO:0006508	GO:GO:0006810	GO:GO:0008150
GO:GO:0008152	GO:GO:0008234	GO:GO:0009058	GO:GO:0009987	GO:GO:0015986	GO:GO:0016020
GO:GO:0016787	GO:GO:0019538	GO:GO:0045261	GO:GO:0046933	GO:GO:0099132	UniProt:M4DGY8
PFAM:PF00112	PFAM:PF00231	PANTHER:PTHR11693	PANTHER:PTHR11693:SF26	InterPro:Papain_like_cys_pep_sf	InterPro:Peptidase_C1A_C
SUPFAM:SSF52943	SUPFAM:SSF54001	UniParc:UPI0002542067	SEG:seg	:	:

Description

AT2G33040 (E=8e-040) | ATP synthase gamma chain, mitochondrial (ATPC)

Coordinates

chrA07:-:20948667..20950778

Molecular Weight (calculated)

56212.2 Da

IEP (calculated)

7.957

GRAVY (calculated)

-0.386

Length

506 amino acids

Sequence
(BLAST)

001: MSDRVTYRDM AIMEEVLNQG HKQVCWAISL TRQLAALLKL RGQLNINARL SIQYLINKVG RSLYGAQTPR PWNGSVRSFE TAIPFLVNGT VLEHVVPLRE
101: FDLQSLTPEN HVLGERRYRA VRMVVHRIDE YPDQAAFEAD LLRCLRQSPV AAAIKVYPSY GRISGNEVYM QQTYERDEVT PLKHSMLLVK SGRDQFGTPY
201: WEFQDSSGET KGRGGYVRIR KGVGLLTEFV EMFLVEEEPP KKKRKAVSVD ASHKRPKNVH NRLSLGPGKH SKSHKLSQGR SRSSSTSTSR KAGSSVRTIS
301: PKSPVPSASA FENMDASYLQ TSGYLPADAT EEQISMAAAS MIRSHSMSGD LQPDPIAPKE ELFPGNIITV TELNKKNPLN YAQVSVLADD ILKNLEFDAL
401: HNKFHSILSP EIIEKESEVG GKLGELDSCE IEAGETKGEV LQNLAEFLFS CVMFNAVLEN ACSEMGAGMS AMDRSSRNAG EMLDRLTLAY NRTLHASMPI
501: ETISGA

Best Arabidopsis Sequence Match ( AT2G33040.1 )
(BLAST)

001: MAMAVFRREG RRLLPSIAAR PIAAIRSPLS SDQEEGLLGV RSISTQVVRN RMKSVKNIQK ITKAMKMVAA SKLRAVQGRA ENSRGLWQPF TALLGDNPSI
101: DVKKSVVVTL SSDKGLCGGI NSTVVKVSRA LYKLNAGPEK EVQFVIVGEK AKAIMFRDSK NDIVLSVTEL NKNPLNYAQV SVLADDILKN VEFDALRIVY
201: NKFHSVVAFL PTVSTVLSPE IIEKESEIGG KLGELDSYEI EGGETKGEIL QNLAEFQFSC VMFNAVLENA CSEMGARMSA MDSSSRNAGE MLDRLTLTYN
301: RTRQASITTE LIEIISGASA LEAAK

Arabidopsis Description

ATPCATP synthase subunit gamma, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q96250]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.