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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: golgi, unclear

Predictor Summary:
  • plastid 1
  • mitochondrion 7
Predictors GFP MS/MS Papers
Winner Takes All:golgi, unclear
Any Predictor:mitochondrion, plastid
ChloroP:plastid
iPSORT:mitochondrion
MultiLoc:mitochondrion
Predotar:mitochondrion
PProwler:mitochondrion
TargetP:mitochondrion
WoLF PSORT:mitochondrion
YLoc:mitochondrion
golgi: 25769308
unclear: 25769308
msms PMID: 25769308 doi
AL Chateigner-Boutin, M Suliman, B Bouchet, C Alvarado, V Lollier, H Rogniaux, F Guillon, C Larré
INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France colette.larre@nantes.inra.fr., INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS1A01G138800.1 Wheat golgi, unclear 99.39 99.39
TraesCS1B01G148500.1 Wheat mitochondrion 98.77 98.77
HORVU1Hr1G031600.1 Barley plasma membrane 98.47 98.47
Os10t0320400-01 Rice mitochondrion 89.26 89.81
Zm00001d048091_P002 Maize mitochondrion 84.36 83.33
EER95278 Sorghum mitochondrion 84.05 83.03
GSMUA_Achr9P07120_001 Banana mitochondrion 79.45 80.19
KRH63239 Soybean mitochondrion 76.69 78.12
KRH54686 Soybean mitochondrion 77.61 78.09
VIT_17s0000g07300.t01 Wine grape mitochondrion 76.07 77.02
Bra021826.1-P Field mustard mitochondrion 73.93 75.08
CDY23771 Canola mitochondrion 73.93 75.08
PGSC0003DMT400063336 Potato mitochondrion 74.54 75.0
Bra005531.1-P Field mustard mitochondrion 74.54 74.77
CDX84716 Canola mitochondrion 74.54 74.77
CDX79484 Canola mitochondrion 74.54 74.77
CDY19433 Canola mitochondrion 74.54 74.77
CDY17130 Canola mitochondrion 74.54 74.77
Solyc03g115110.2.1 Tomato plastid 74.23 74.69
Bra022908.1-P Field mustard mitochondrion 73.93 74.15
AT2G33040.1 Thale cress mitochondrion 73.62 73.85
CDY37753 Canola mitochondrion 56.44 71.6
Zm00001d028207_P001 Maize cytosol, mitochondrion, plastid 80.06 68.32
CDX88259 Canola nucleus 33.44 25.17
TraesCS2D01G229600.1 Wheat plastid 27.61 25.07
CDY72042 Canola cytosol 31.29 23.89
Bra015765.1-P Field mustard nucleus 32.52 20.95
Protein Annotations
Gene3D:1.10.287.80MapMan:2.4.6.2.3Gene3D:3.40.1380.10InterPro:ATP_synth_F1_ATPase_gsuInterPro:ATP_synth_F1_gsuInterPro:ATP_synth_F1_gsu_CS
GO:GO:0003674GO:GO:0003824GO:GO:0005215GO:GO:0005575GO:GO:0005622GO:GO:0005623
GO:GO:0006139GO:GO:0006810GO:GO:0008150GO:GO:0008152GO:GO:0009058GO:GO:0009987
GO:GO:0015986GO:GO:0016020GO:GO:0016787GO:GO:0045261GO:GO:0046933HAMAP:MF_00815
PFAM:PF00231PIRSF:PIRSF039089PRINTS:PR00126ScanProsite:PS00153PANTHER:PTHR11693PANTHER:PTHR11693:SF26
SUPFAM:SSF52943TIGRFAMs:TIGR01146EnsemblPlantsGene:TraesCS1D01G132700EnsemblPlants:TraesCS1D01G132700.1TIGR:cd12151SEG:seg
Description
No Description!
Coordinates
chr1D:+:159139997..159144400
Molecular Weight (calculated)
35441.0 Da
IEP (calculated)
10.026
GRAVY (calculated)
-0.187
Length
326 amino acids
Sequence
(BLAST)
001: MAMAIAALRR EGRRVLLNTP SPAATMAALS PAASQSQIAP LGARSISTQI VRNRMKSVKN IQKITKAMKM VAASKLRAVQ TRTENSRGLW QPFTALLGDA
101: PSVNVKKNVI VAITSDKGLC GGINSTSVKV SKALQKMTSG PEKESKYVIL GEKGKVQLIR DSRKHIEMTV SELQKNPINY TQVAVLADDI LKNVEYDAIR
201: VVFNKFQSVI SFRPTLATIL SPEVMEKESE SGGKVGQLDS YEIEGGETKS EILQNLTEFQ FSCVMYNAVL ENACSELGAR MSAMDSSSRN AGEMLDRLTL
301: TYNRTRQASI TTELTEIISG ASALEG
Best Arabidopsis Sequence Match ( AT2G33040.1 )
(BLAST)
001: MAMAVFRREG RRLLPSIAAR PIAAIRSPLS SDQEEGLLGV RSISTQVVRN RMKSVKNIQK ITKAMKMVAA SKLRAVQGRA ENSRGLWQPF TALLGDNPSI
101: DVKKSVVVTL SSDKGLCGGI NSTVVKVSRA LYKLNAGPEK EVQFVIVGEK AKAIMFRDSK NDIVLSVTEL NKNPLNYAQV SVLADDILKN VEFDALRIVY
201: NKFHSVVAFL PTVSTVLSPE IIEKESEIGG KLGELDSYEI EGGETKGEIL QNLAEFQFSC VMFNAVLENA CSEMGARMSA MDSSSRNAGE MLDRLTLTYN
301: RTRQASITTE LIEIISGASA LEAAK
Arabidopsis Description
ATPCATP synthase subunit gamma, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q96250]
SUBAcon: [mitochondrion]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.