Factsheet for HORVU1Hr1G031600.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 1
mitochondrion 6

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	mitochondrion, plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
Predotar:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	mitochondrion

plasma membrane: 29385242

msms PMID: 29385242 doi

K Witzel, A Matros, ALB Møller, E Ramireddy, C Finnie, M Peukert, T Rutten, A Herzog, G Kunze, M Melzer, S Kaspar-Schoenefeld, T Schmülling, B Svensson, HP Mock

Biosystems Engineering, Fraunhofer Institute for Factory Operation and Automation, Joseph-von-Fraunhofer-Straße 1, 39106, Magdeburg, Germany., Institute of Biology/Applied Genetics, Dahlem Centre of Plant Sciences, Free University of Berlin, Albrecht-Thaer-Weg 6, 14195, Berlin, Germany., Leibniz Institute of Plant Genetics and Crop Plant Research, Corrensstraße 3, 06466, Stadt Seeland, Gatersleben, Germany., Leibniz Institute of Vegetable and Ornamental Crops, Theodor-Echtermeyer-Weg 1, 14979, Großbeeren, Germany., Technical University of Denmark, Søltofts Plads, Building 224, 2800, Kongens Lyngby, Denmark.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1A01G138800.1	Wheat	golgi, unclear	98.47	98.47
TraesCS1B01G148500.1	Wheat	mitochondrion	98.47	98.47
TraesCS1D01G132700.1	Wheat	golgi, unclear	98.47	98.47
Os10t0320400-01	Rice	mitochondrion	90.18	90.74
Zm00001d048091_P002	Maize	mitochondrion	84.97	83.94
EER95278	Sorghum	mitochondrion	84.66	83.64
GSMUA_Achr9P07120_001	Banana	mitochondrion	80.06	80.81
Zm00001d028207_P001	Maize	cytosol, mitochondrion, plastid	80.37	68.59
HORVU7Hr1G085110.1	Barley	cytosol	40.49	63.77

Protein Annotations

Gene3D:1.10.287.80	MapMan:2.4.6.2.3	Gene3D:3.40.1380.10	EMBL:AK356059	InterPro:ATP_synth_F1_ATPase_gsu	InterPro:ATP_synth_F1_gsu
InterPro:ATP_synth_F1_gsu_CS	UniProt:F2CWQ6	GO:GO:0003674	GO:GO:0003824	GO:GO:0005215	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0006139	GO:GO:0006810	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	GO:GO:0015986	GO:GO:0016020	GO:GO:0016787	GO:GO:0045261
GO:GO:0046933	GO:GO:0099132	EnsemblPlantsGene:HORVU1Hr1G031600	EnsemblPlants:HORVU1Hr1G031600.1	HAMAP:MF_00815	PFAM:PF00231
PIRSF:PIRSF039089	PRINTS:PR00126	ScanProsite:PS00153	PANTHER:PTHR11693	PANTHER:PTHR11693:SF26	SUPFAM:SSF52943
TIGRFAMs:TIGR01146	UniParc:UPI0002004A69	SEG:seg	:	:	:

Description

Predicted protein [Source:UniProtKB/TrEMBL;Acc:F2CWQ6]

Coordinates

chrchr1H:-:191959614..191965456

Molecular Weight (calculated)

35426.9 Da

IEP (calculated)

9.924

GRAVY (calculated)

-0.201

Length

326 amino acids

Sequence
(BLAST)

001: MAMAMAALRR EGRRVLLSTP SPAAAMAAHS PAASQSQIAP LGARSISTQI VRNRMKSVKN IQKITKAMKM VAASKLRAVQ TRTENSRGLW QPFTALLGDA
101: PSVNVKKNVI VAITSDKGLC GGINSTSVKV SKALQKMTSG PEKESKYVIL GEKGKVQLIR DSRKHIEMTV SELQKNPINY TQVAVLADDI LKNVEYDAIR
201: VVFNKFQSVI SFRPTLATIL SPEVMEKESE SGGKVGELDS YEIEGGETKS EILQNLTEFQ FSCVMYNAVL ENACSELGAR MSAMDSSSRN AGEMLDRLTL
301: TYNRTRQASI TTELTEIISG ASALEG

Best Arabidopsis Sequence Match ( AT2G33040.1 )
(BLAST)

001: MAMAVFRREG RRLLPSIAAR PIAAIRSPLS SDQEEGLLGV RSISTQVVRN RMKSVKNIQK ITKAMKMVAA SKLRAVQGRA ENSRGLWQPF TALLGDNPSI
101: DVKKSVVVTL SSDKGLCGGI NSTVVKVSRA LYKLNAGPEK EVQFVIVGEK AKAIMFRDSK NDIVLSVTEL NKNPLNYAQV SVLADDILKN VEFDALRIVY
201: NKFHSVVAFL PTVSTVLSPE IIEKESEIGG KLGELDSYEI EGGETKGEIL QNLAEFQFSC VMFNAVLENA CSEMGARMSA MDSSSRNAGE MLDRLTLTYN
301: RTRQASITTE LIEIISGASA LEAAK

Arabidopsis Description

ATPCATP synthase subunit gamma, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q96250]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.