Factsheet for TraesCS1B01G148500.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 7

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1D01G132700.1	Wheat	golgi, unclear	98.77	98.77
TraesCS1A01G138800.1	Wheat	golgi, unclear	98.77	98.77
HORVU1Hr1G031600.1	Barley	plasma membrane	98.47	98.47
Os10t0320400-01	Rice	mitochondrion	89.88	90.43
Zm00001d048091_P002	Maize	mitochondrion	84.66	83.64
EER95278	Sorghum	mitochondrion	84.36	83.33
GSMUA_Achr9P07120_001	Banana	mitochondrion	79.75	80.5
KRH63239	Soybean	mitochondrion	76.99	78.44
KRH54686	Soybean	mitochondrion	77.91	78.4
VIT_17s0000g07300.t01	Wine grape	mitochondrion	76.69	77.64
Bra021826.1-P	Field mustard	mitochondrion	74.23	75.39
CDY23771	Canola	mitochondrion	74.23	75.39
PGSC0003DMT400063336	Potato	mitochondrion	74.85	75.31
Bra005531.1-P	Field mustard	mitochondrion	74.85	75.08
CDX84716	Canola	mitochondrion	74.85	75.08
CDX79484	Canola	mitochondrion	74.85	75.08
CDY19433	Canola	mitochondrion	74.85	75.08
CDY17130	Canola	mitochondrion	74.85	75.08
Solyc03g115110.2.1	Tomato	plastid	74.23	74.69
Bra022908.1-P	Field mustard	mitochondrion	74.23	74.46
AT2G33040.1	Thale cress	mitochondrion	73.93	74.15
CDY37753	Canola	mitochondrion	56.75	71.98
Zm00001d028207_P001	Maize	cytosol, mitochondrion, plastid	80.37	68.59
CDX88259	Canola	nucleus	33.44	25.17
TraesCS2B01G273900.1	Wheat	plastid	27.3	24.86
CDY72042	Canola	cytosol	31.29	23.89
Bra015765.1-P	Field mustard	nucleus	32.52	20.95

Protein Annotations

Gene3D:1.10.287.80	MapMan:2.4.6.2.3	Gene3D:3.40.1380.10	InterPro:ATP_synth_F1_ATPase_gsu	InterPro:ATP_synth_F1_gsu	InterPro:ATP_synth_F1_gsu_CS
GO:GO:0003674	GO:GO:0003824	GO:GO:0005215	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0006139	GO:GO:0006810	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
GO:GO:0015986	GO:GO:0016020	GO:GO:0016787	GO:GO:0045261	GO:GO:0046933	HAMAP:MF_00815
PFAM:PF00231	PIRSF:PIRSF039089	PRINTS:PR00126	ScanProsite:PS00153	PANTHER:PTHR11693	PANTHER:PTHR11693:SF26
SUPFAM:SSF52943	TIGRFAMs:TIGR01146	EnsemblPlantsGene:TraesCS1B01G148500	EnsemblPlants:TraesCS1B01G148500.1	TIGR:cd12151	SEG:seg

Description

No Description!

Coordinates

chr1B:+:217560163..217564505

Molecular Weight (calculated)

35442.0 Da

IEP (calculated)

10.026

GRAVY (calculated)

-0.184

Length

326 amino acids

Sequence
(BLAST)

001: MAMAMAALRR EGRRVLLNTP STAAAMAALS PAASHSQIAP LGARSISTQI VRNRMKSVKN IQKITKAMKM VAASKLRAVQ TRTENSRGLW QPFTALLGDA
101: PSVNVKKNVI VAITSDKGLC GGINSTSVKV SKALQKMTSG PEKESKYVIL GEKGKVQLIR DSRKHIEMTV SELQKNPINY TQVAVLADDI LKNVEYDAIR
201: VVFNKFQSVI SFRPTLATIL SPEVMEKESE SGGKVGQLDS YEIEGGETKS EILQNLTEFQ FSCVMYNAVL ENACSELGAR MSAMDSSSRN AGEMLDRLTL
301: TYNRTRQASI TTELTEIISG ASALEG

Best Arabidopsis Sequence Match ( AT2G33040.1 )
(BLAST)

001: MAMAVFRREG RRLLPSIAAR PIAAIRSPLS SDQEEGLLGV RSISTQVVRN RMKSVKNIQK ITKAMKMVAA SKLRAVQGRA ENSRGLWQPF TALLGDNPSI
101: DVKKSVVVTL SSDKGLCGGI NSTVVKVSRA LYKLNAGPEK EVQFVIVGEK AKAIMFRDSK NDIVLSVTEL NKNPLNYAQV SVLADDILKN VEFDALRIVY
201: NKFHSVVAFL PTVSTVLSPE IIEKESEIGG KLGELDSYEI EGGETKGEIL QNLAEFQFSC VMFNAVLENA CSEMGARMSA MDSSSRNAGE MLDRLTLTYN
301: RTRQASITTE LIEIISGASA LEAAK

Arabidopsis Description

ATPCATP synthase subunit gamma, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q96250]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.