Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
- cytosol 1
Predictors | GFP | MS/MS | Papers | ||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
CDY72042 | Canola | cytosol | 61.66 | 62.53 |
Bra015765.1-P | Field mustard | nucleus | 53.35 | 45.65 |
HORVU7Hr1G085110.1 | Barley | cytosol | 18.48 | 38.65 |
CDY23771 | Canola | mitochondrion | 28.64 | 38.63 |
CDX79484 | Canola | mitochondrion | 28.87 | 38.46 |
CDX84716 | Canola | mitochondrion | 28.87 | 38.46 |
CDY17130 | Canola | mitochondrion | 28.87 | 38.46 |
CDY19433 | Canola | mitochondrion | 28.87 | 38.46 |
KRH54686 | Soybean | mitochondrion | 26.33 | 35.19 |
VIT_17s0000g07300.t01 | Wine grape | mitochondrion | 26.1 | 35.09 |
KRH63239 | Soybean | mitochondrion | 25.87 | 35.0 |
CDX88260 | Canola | nucleus | 12.24 | 34.42 |
Os10t0320400-01 | Rice | mitochondrion | 25.64 | 34.26 |
CDY37753 | Canola | mitochondrion | 19.86 | 33.46 |
TraesCS1D01G132700.1 | Wheat | golgi, unclear | 25.17 | 33.44 |
TraesCS1B01G148500.1 | Wheat | mitochondrion | 25.17 | 33.44 |
TraesCS1A01G138800.1 | Wheat | golgi, unclear | 25.17 | 33.44 |
GSMUA_Achr9P07120_001 | Banana | mitochondrion | 24.71 | 33.13 |
EER95278 | Sorghum | mitochondrion | 24.94 | 32.73 |
PGSC0003DMT400063336 | Potato | mitochondrion | 24.48 | 32.72 |
Solyc03g115110.2.1 | Tomato | plastid | 23.79 | 31.79 |
CDY16654 | Canola | plastid | 13.16 | 15.2 |
CDX94569 | Canola | plastid | 13.16 | 15.2 |
CDX96834 | Canola | plastid | 12.93 | 14.78 |
CDX83971 | Canola | plastid | 12.47 | 14.25 |
CDY21312 | Canola | plastid | 12.24 | 14.17 |
CDX90874 | Canola | plastid | 12.24 | 14.17 |
Zm00001d044380_P001 | Maize | cytosol | 3.93 | 10.3 |
CDY33548 | Canola | cytosol, mitochondrion | 2.77 | 9.52 |
CDX97316 | Canola | plastid | 7.39 | 6.74 |
Zm00001d010316_P001 | Maize | cytosol | 0.92 | 5.33 |
Protein Annotations
Gene3D:3.40.1380.10 | Gene3D:3.90.70.10 | MapMan:35.1 | GO:A0A078DIC3 | InterPro:ATP_synth_F1_ATPase_gsu | InterPro:ATP_synth_F1_gsu |
EnsemblPlants:CDX88259 | ProteinID:CDX88259 | ProteinID:CDX88259.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005215 |
GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0006139 | GO:GO:0006810 | GO:GO:0008150 |
GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0015986 | GO:GO:0016020 | GO:GO:0016787 |
GO:GO:0045261 | GO:GO:0046933 | EnsemblPlantsGene:GSBRNA2T00147750001 | PFAM:PF00231 | PRINTS:PR00126 | PANTHER:PTHR11693 |
PANTHER:PTHR11693:SF26 | InterPro:Papain_like_cys_pep_sf | SUPFAM:SSF52943 | SUPFAM:SSF54001 | UniParc:UPI0004EF10DC | SEG:seg |
Description
BnaC06g37030D
Coordinates
chrLK031855:+:38292..40531
Molecular Weight (calculated)
48252.8 Da
IEP (calculated)
7.863
GRAVY (calculated)
-0.323
Length
433 amino acids
Sequence
(BLAST)
(BLAST)
001: MSDRVTYRDM GIMEEVLNQR QKQVCWAISL TRQLAALLKL RGQLNINASL SIQYLINKVG SSLFGAQMSR PWNGSVRSLE TAIPFLVNGT VLENLVPLRQ
101: FDLQSSTPEN HVLGERRYRA VRIVVHRIDE YRVAFEADLL RCLHQSPVAA VIKLYPSYGR ITGNQIYRQR TSERDEATPL KHSMLGGYVK IRKGVGLISE
201: FVEMFLVEEE PRKKKRKAVS VDASHKRPKK VYKRLSLGPG KQSKSHKLSQ GLWNSTSTSR EAGSFVRPIS PKSPVPSASA FENMGESDDD IPELDASYFQ
301: TNGYLPADAT EEQISMAAAS MIRSHSLSEF DALCIVYNKF HSVLSPKIIE KESEVGGKLG ELDSCEIEAG ETKGEILQNL AEFQFSCVMF NAVLENACSE
401: MGAGMSAMDS SSRNAGEMLD HLTLAYNREL EAA
101: FDLQSSTPEN HVLGERRYRA VRIVVHRIDE YRVAFEADLL RCLHQSPVAA VIKLYPSYGR ITGNQIYRQR TSERDEATPL KHSMLGGYVK IRKGVGLISE
201: FVEMFLVEEE PRKKKRKAVS VDASHKRPKK VYKRLSLGPG KQSKSHKLSQ GLWNSTSTSR EAGSFVRPIS PKSPVPSASA FENMGESDDD IPELDASYFQ
301: TNGYLPADAT EEQISMAAAS MIRSHSLSEF DALCIVYNKF HSVLSPKIIE KESEVGGKLG ELDSCEIEAG ETKGEILQNL AEFQFSCVMF NAVLENACSE
401: MGAGMSAMDS SSRNAGEMLD HLTLAYNREL EAA
001: MEPNIYQLAL AALFGASFVA VSGFFMHFKA LNLVLERGKE RKENPDGDEP QNPTLVRRRS QVRRKVNDQY GRSPASLPDA TPFTDGGGGG GGDTGRSNGH
101: VYVDEIPPGL PRLHTPSEGR ASVHGASSIR KTGSFVRPIS PKSPVASASA FESVEESDDD DNLTNSEGLD ASYLQANGDN EMPADANEEQ ISMAASSMIR
201: SHSVSGDLHG VQPDPIAADI LRKEPEQETF VRLNVPLEVP TSDEVEAYKC LQECLELRKR YVFQETVAPW EKEVISDPST PKPNTEPFAH YPQGKSDHCF
301: EMQDGVVHVF ANKDAKEDLF PVADATAFFT DLHHVLKVIA AGNIRTLCHR RLVLLEQKFN LHLMLNADKE FLAQKSAPHR DFYNVRKVDT HVHHSACMNQ
401: KHLLRFIKSK LRKEPDEVVI FRDGTYLTLR EVFESLDLTG YDLNVDLLDV HADKSTFHRF DKFNLKYNPC GQSRLREIFL KQDNLIQGRF LGEITKQVFS
501: DLEASKYQMA EYRISIYGRK MSEWDQLASW IVNNDLYSEN VVWLIQLPRL YNIYKDMGIV TSFQNILDNI FIPLFEATVD PDSHPQLHVF LKQVVGFDLV
601: DDESKPERRP TKHMPTPAQW TNAFNPAFSY YVYYCYANLY VLNKLRESKG MTTITLRPHS GEAGDIDHLA ATFLTCHSIA HGINLRKSPV LQYLYYLAQI
701: GLAMSPLSNN SLFLDYHRNP FPVFFLRGLN VSLSTDDPLQ IHLTKEPLVE EYSIAASVWK LSACDLCEIA RNSVYQSGFS HALKSHWIGK DYYKRGPDGN
801: DIHKTNVPHI RVEFRDTIWK EEMQQVYLGK AVISDEVVP
101: VYVDEIPPGL PRLHTPSEGR ASVHGASSIR KTGSFVRPIS PKSPVASASA FESVEESDDD DNLTNSEGLD ASYLQANGDN EMPADANEEQ ISMAASSMIR
201: SHSVSGDLHG VQPDPIAADI LRKEPEQETF VRLNVPLEVP TSDEVEAYKC LQECLELRKR YVFQETVAPW EKEVISDPST PKPNTEPFAH YPQGKSDHCF
301: EMQDGVVHVF ANKDAKEDLF PVADATAFFT DLHHVLKVIA AGNIRTLCHR RLVLLEQKFN LHLMLNADKE FLAQKSAPHR DFYNVRKVDT HVHHSACMNQ
401: KHLLRFIKSK LRKEPDEVVI FRDGTYLTLR EVFESLDLTG YDLNVDLLDV HADKSTFHRF DKFNLKYNPC GQSRLREIFL KQDNLIQGRF LGEITKQVFS
501: DLEASKYQMA EYRISIYGRK MSEWDQLASW IVNNDLYSEN VVWLIQLPRL YNIYKDMGIV TSFQNILDNI FIPLFEATVD PDSHPQLHVF LKQVVGFDLV
601: DDESKPERRP TKHMPTPAQW TNAFNPAFSY YVYYCYANLY VLNKLRESKG MTTITLRPHS GEAGDIDHLA ATFLTCHSIA HGINLRKSPV LQYLYYLAQI
701: GLAMSPLSNN SLFLDYHRNP FPVFFLRGLN VSLSTDDPLQ IHLTKEPLVE EYSIAASVWK LSACDLCEIA RNSVYQSGFS HALKSHWIGK DYYKRGPDGN
801: DIHKTNVPHI RVEFRDTIWK EEMQQVYLGK AVISDEVVP
Arabidopsis Description
AMPDFAC1 [Source:UniProtKB/TrEMBL;Acc:A0A178VY66]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.