Factsheet for Os10t0320400-01

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 10

Predictors

GFP

MS/MS

Papers

plastid: 17189339
mitochondrion: 19010998
cytosol: 19685898
mitochondrion: 23027867
golgi: 25047511
plasma membrane: 27800704
plastid: 27992503
plasma membrane: 28056797

msms PMID: 23027867 doi

G Liu, H Tian, YQ Huang, J Hu, YX Ji, SQ Li, YQ Feng, L Guo, YG Zhu

State Key Laboratory of Hybrid Rice, College of Life Sciences, Wuhan University, Wuhan 430072, China.

msms PMID: 27800704 doi

J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu

Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.

msms PMID: 19685898 doi

KA Doroshenk, AJ Crofts, RT Morris, JJ Wyrick, TW Okita

Institute of Biological Chemistry, Washington State University, Pullman, Washington 99164-6340, USA.

msms PMID: 28056797 doi

N Yang, T Wang

Key Laboratory of Plant Molecular Physiology, Institute of Botany, Chinese Academy of Sciences, and National Center for Plant Gene Research, 20 Nanxincun, Xiangshan, Haidianqu, Beijing, 100093, China., Key Laboratory of Plant Molecular Physiology, Institute of Botany, Chinese Academy of Sciences, and National Center for Plant Gene Research, 20 Nanxincun, Xiangshan, Haidianqu, Beijing, 100093, China. twang@ibcas.ac.cn.

msms PMID: 19010998 doi

S Huang, NL Taylor, R Narsai, H Eubel, J Whelan, AH Millar

Australian Research Council Centre of Excellence in Plant Energy Biology, M316, University of Western Australia, Crawley, 6009 Western Australia, Australia.

msms PMID: 27992503 doi

S Xing, X Meng, L Zhou, H Mujahid, C Zhao, Y Zhang, C Wang, Z Peng

Department of Biochemistry, Molecular Biology, Entomology and Plant Pathology, Mississippi State University, Starkville, Mississippi, United States of America., Institute of Food Crops, Jiangsu Academy of Agricultural Sciences, Jiangsu High Quality Rice Research and Development Center, Nanjing Branch of China National Center for Rice Improvement, Nanjing, Jiangsu, China.

msms PMID: 17189339 doi

T Kleffmann, A von Zychlinski, D Russenberger, M Hirsch-Hoffmann, P Gehrig, W Gruissem, S Baginsky

Institute of Plant Sciences, Eidgenössische Technische Hochschule Zurich, 8092 Zurich, Switzerland.

msms PMID: 25047511 doi

Y Nie, F Huang, S Dong, L Li, P Gao, H Zhao, Y Wang, S Han

Beijing Key Laboratory of Gene Resource and Molecular Development, Beijing Normal University, College of Life Sciences, Beijing, P. R. China.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU1Hr1G031600.1	Barley	plasma membrane	90.74	90.18
TraesCS1B01G148500.1	Wheat	mitochondrion	90.43	89.88
TraesCS1D01G132700.1	Wheat	golgi, unclear	89.81	89.26
TraesCS1A01G138800.1	Wheat	golgi, unclear	89.81	89.26
EER95278	Sorghum	mitochondrion	86.73	85.15
Zm00001d048091_P002	Maize	mitochondrion	86.42	84.85
GSMUA_Achr9P07120_001	Banana	mitochondrion	79.94	80.19
KRH54686	Soybean	mitochondrion	77.78	77.78
KRH63239	Soybean	mitochondrion	76.23	77.19
VIT_17s0000g07300.t01	Wine grape	mitochondrion	75.31	75.78
CDY19433	Canola	mitochondrion	75.31	75.08
PGSC0003DMT400063336	Potato	mitochondrion	75.0	75.0
Bra005531.1-P	Field mustard	mitochondrion	75.0	74.77
CDX79484	Canola	mitochondrion	75.0	74.77
CDX84716	Canola	mitochondrion	75.0	74.77
CDY17130	Canola	mitochondrion	75.0	74.77
CDY23771	Canola	mitochondrion	74.07	74.77
Bra021826.1-P	Field mustard	mitochondrion	74.07	74.77
AT2G33040.1	Thale cress	mitochondrion	74.38	74.15
Bra022908.1-P	Field mustard	mitochondrion	74.38	74.15
Solyc03g115110.2.1	Tomato	plastid	74.07	74.07
CDY37753	Canola	mitochondrion	56.17	70.82
Zm00001d028207_P001	Maize	cytosol, mitochondrion, plastid	82.1	69.63
CDX88259	Canola	nucleus	34.26	25.64
Os07t0513000-01	Rice	plastid	27.78	25.14
CDY72042	Canola	cytosol	31.17	23.65
Bra015765.1-P	Field mustard	nucleus	32.72	20.95
Os07t0513100-01	Rice	mitochondrion, nucleus	8.64	2.84

Protein Annotations

Gene3D:1.10.287.80	MapMan:2.4.6.2.3	Gene3D:3.40.1380.10	EntrezGene:4348305	ProteinID:AAP52916.2	EMBL:AK072694
InterPro:ATP_synth_F1_ATPase_gsu	InterPro:ATP_synth_F1_gsu	InterPro:ATP_synth_F1_gsu_CS	ProteinID:BAF26253.1	ProteinID:BAT10311.1	GO:GO:0003674
GO:GO:0003824	GO:GO:0005215	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0006139
GO:GO:0006810	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0015986
GO:GO:0016020	GO:GO:0016787	GO:GO:0045261	GO:GO:0046933	GO:GO:0099132	EMBL:KC140130
HAMAP:MF_00815	EnsemblPlantsGene:Os10g0320400	EnsemblPlants:Os10t0320400-01	PFAM:PF00231	PIRSF:PIRSF039089	PRINTS:PR00126
ScanProsite:PS00153	PANTHER:PTHR11693	PANTHER:PTHR11693:SF26	UniProt:Q7G3Y4	SUPFAM:SSF52943	TIGRFAMs:TIGR01146
UniParc:UPI0000DB4BC1	RefSeq:XP_015614877.1	SEG:seg	:	:	:

Description

Similar to ATP synthase gamma chain, mitochondrial precursor (EC 3.6.3.14). (Os10t0320400-01)

Coordinates

chr10:+:8691901..8697228

Molecular Weight (calculated)

35262.6 Da

IEP (calculated)

9.512

GRAVY (calculated)

-0.184

Length

324 amino acids

Sequence
(BLAST)

001: MAMAALRRDG RRVLLSSTPS PAAAMAARSP AAAHQEIAPL GARSVSTQVV RTRMKSVRNI QKITKAMKMV AASKLRAVQI RTENSRGLWQ PFTALLGDVP
101: SVDVKKNVIV AITSDKGLCG GINSTSVKVS KALHKLTSGP EKESKYVILG EKGKVQLIRD SKDNIEMTVS ELQKNPINYT QIAVLADDIL KNVEYDALRV
201: VFNKFHSVIS FKPTMTTILS PEVMEKESES GKVGDLDSYE IEGGETKSEI LQNLTEFQFS CVMYNAALEN ACSELGARMS AMDSSSRNAG EMLDRLTLTY
301: NRTRQASITT ELIEIISGAS ALEG

Best Arabidopsis Sequence Match ( AT2G33040.1 )
(BLAST)

001: MAMAVFRREG RRLLPSIAAR PIAAIRSPLS SDQEEGLLGV RSISTQVVRN RMKSVKNIQK ITKAMKMVAA SKLRAVQGRA ENSRGLWQPF TALLGDNPSI
101: DVKKSVVVTL SSDKGLCGGI NSTVVKVSRA LYKLNAGPEK EVQFVIVGEK AKAIMFRDSK NDIVLSVTEL NKNPLNYAQV SVLADDILKN VEFDALRIVY
201: NKFHSVVAFL PTVSTVLSPE IIEKESEIGG KLGELDSYEI EGGETKGEIL QNLAEFQFSC VMFNAVLENA CSEMGARMSA MDSSSRNAGE MLDRLTLTYN
301: RTRQASITTE LIEIISGASA LEAAK

Arabidopsis Description

ATPCATP synthase subunit gamma, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q96250]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.