Factsheet for Bra022908.1-P

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
mitochondrion 9

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX84716	Canola	mitochondrion	99.38	99.38
CDX79484	Canola	mitochondrion	99.38	99.38
Bra005531.1-P	Field mustard	mitochondrion	97.54	97.54
AT2G33040.1	Thale cress	mitochondrion	96.92	96.92
Bra021826.1-P	Field mustard	mitochondrion	94.77	95.95
KRH63239	Soybean	mitochondrion	79.08	80.31
KRH54686	Soybean	mitochondrion	79.38	79.63
GSMUA_Achr9P07120_001	Banana	mitochondrion	76.92	77.4
PGSC0003DMT400063336	Potato	mitochondrion	75.69	75.93
Solyc03g115110.2.1	Tomato	plastid	75.08	75.31
VIT_17s0000g07300.t01	Wine grape	mitochondrion	74.46	75.16
EER95278	Sorghum	mitochondrion	75.69	74.55
TraesCS1A01G138800.1	Wheat	golgi, unclear	74.77	74.54
Os10t0320400-01	Rice	mitochondrion	74.15	74.38
TraesCS1B01G148500.1	Wheat	mitochondrion	74.46	74.23
TraesCS1D01G132700.1	Wheat	golgi, unclear	74.15	73.93
HORVU7Hr1G085110.1	Barley	cytosol	33.54	52.66
Bra029511.1-P	Field mustard	plastid	29.54	25.6
Bra000802.1-P	Field mustard	plastid	29.23	25.4
Bra016652.1-P	Field mustard	plastid	28.92	24.8
Bra015765.1-P	Field mustard	nucleus	36.31	23.32
Bra018503.1-P	Field mustard	plastid	27.69	17.86
Zm00001d044380_P001	Maize	cytosol	8.62	16.97
Zm00001d010316_P001	Maize	cytosol	3.69	16.0

Protein Annotations

Gene3D:1.10.287.80	MapMan:2.4.6.2.3	Gene3D:3.40.1380.10	InterPro:ATP_synth_F1_ATPase_gsu	InterPro:ATP_synth_F1_gsu	InterPro:ATP_synth_F1_gsu_CS
EnsemblPlantsGene:Bra022908	EnsemblPlants:Bra022908.1	EnsemblPlants:Bra022908.1-P	GO:GO:0003674	GO:GO:0003824	GO:GO:0005215
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0006139	GO:GO:0006810	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0015986	GO:GO:0016020	GO:GO:0016787
GO:GO:0045261	GO:GO:0046933	GO:GO:0099132	UniProt:M4E2A8	HAMAP:MF_00815	PFAM:PF00231
PIRSF:PIRSF039089	PRINTS:PR00126	ScanProsite:PS00153	PANTHER:PTHR11693	PANTHER:PTHR11693:SF26	SUPFAM:SSF52943
TIGRFAMs:TIGR01146	UniParc:UPI000253FCB6	:	:	:	:

Description

AT2G33040 (E=2e-172) | ATP synthase gamma chain, mitochondrial (ATPC)

Coordinates

chrA03:+:7685130..7687203

Molecular Weight (calculated)

35431.0 Da

IEP (calculated)

9.550

GRAVY (calculated)

-0.096

Length

325 amino acids

Sequence
(BLAST)

001: MAMAVFRREG RRLLPSIAAR PIAPIRSPLS SDQEEGPLGV RSISTQVVRN RMKSVKNIQK ITKAMKMVAA SKLRAVQGRA ENSRGLWQPF TALLGDNPSI
101: DVKKSVVVTL SSDKGLCGGI NSTVVKVSRA LYKLNAGPEK DVKFVIVGEK AKAIMFRDSK NDISLTVTEL NKNPLNYAQV SVLADDILKN VEFDALRIVY
201: NKFHSVVAFL PTVATVLSPE IIEKESEVGG KLGELDSYEI EGGETKGEIL QNLAEFQFSC VMFNAVLENA CSEMGARMSA MDSSSRNAGE MLDRLTINYN
301: RTRQASITTE LIEIISGASA LEAAK

Best Arabidopsis Sequence Match ( AT2G33040.1 )
(BLAST)

001: MAMAVFRREG RRLLPSIAAR PIAAIRSPLS SDQEEGLLGV RSISTQVVRN RMKSVKNIQK ITKAMKMVAA SKLRAVQGRA ENSRGLWQPF TALLGDNPSI
101: DVKKSVVVTL SSDKGLCGGI NSTVVKVSRA LYKLNAGPEK EVQFVIVGEK AKAIMFRDSK NDIVLSVTEL NKNPLNYAQV SVLADDILKN VEFDALRIVY
201: NKFHSVVAFL PTVSTVLSPE IIEKESEIGG KLGELDSYEI EGGETKGEIL QNLAEFQFSC VMFNAVLENA CSEMGARMSA MDSSSRNAGE MLDRLTLTYN
301: RTRQASITTE LIEIISGASA LEAAK

Arabidopsis Description

ATPCATP synthase subunit gamma, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q96250]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.