CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 10
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d048091_P002	Maize	mitochondrion	94.55	94.55
Os10t0320400-01	Rice	mitochondrion	85.15	86.73
HORVU1Hr1G031600.1	Barley	plasma membrane	83.64	84.66
TraesCS1B01G148500.1	Wheat	mitochondrion	83.33	84.36
TraesCS1D01G132700.1	Wheat	golgi, unclear	83.03	84.05
TraesCS1A01G138800.1	Wheat	golgi, unclear	83.03	84.05
GSMUA_Achr9P07120_001	Banana	mitochondrion	80.91	82.66
KRH54686	Soybean	mitochondrion	76.97	78.4
KRH63239	Soybean	mitochondrion	75.45	77.81
VIT_17s0000g07300.t01	Wine grape	mitochondrion	75.45	77.33
CDY23771	Canola	mitochondrion	74.85	76.95
Bra021826.1-P	Field mustard	mitochondrion	74.85	76.95
CDY19433	Canola	mitochondrion	75.45	76.62
CDX79484	Canola	mitochondrion	75.15	76.31
CDX84716	Canola	mitochondrion	75.15	76.31
PGSC0003DMT400063336	Potato	mitochondrion	74.85	76.23
Bra005531.1-P	Field mustard	mitochondrion	74.85	76.0
CDY17130	Canola	mitochondrion	74.85	76.0
Bra022908.1-P	Field mustard	mitochondrion	74.55	75.69
AT2G33040.1	Thale cress	mitochondrion	74.24	75.38
Solyc03g115110.2.1	Tomato	plastid	73.03	74.38
CDY37753	Canola	mitochondrion	57.27	73.54
Zm00001d028207_P001	Maize	cytosol, mitochondrion, plastid	82.42	71.2
CDX88259	Canola	nucleus	32.73	24.94
EES05204	Sorghum	plastid	15.45	23.94
KXG36319	Sorghum	plastid	26.06	23.89
CDY72042	Canola	cytosol	30.91	23.89
Bra015765.1-P	Field mustard	nucleus	32.12	20.95

Protein Annotations

Gene3D:1.10.287.80	MapMan:2.4.6.2.3	Gene3D:3.40.1380.10	EntrezGene:8085308	InterPro:ATP_synth_F1_ATPase_gsu	InterPro:ATP_synth_F1_gsu
InterPro:ATP_synth_F1_gsu_CS	UniProt:C5WST3	EnsemblPlants:EER95278	ProteinID:EER95278	ProteinID:EER95278.1	GO:GO:0003674
GO:GO:0003824	GO:GO:0005215	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0006139
GO:GO:0006810	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0015986
GO:GO:0016020	GO:GO:0016787	GO:GO:0045261	GO:GO:0046933	GO:GO:0099132	HAMAP:MF_00815
PFAM:PF00231	PIRSF:PIRSF039089	PRINTS:PR00126	ScanProsite:PS00153	PANTHER:PTHR11693	PANTHER:PTHR11693:SF26
EnsemblPlantsGene:SORBI_3001G457000	SUPFAM:SSF52943	unigene:Sbi.7463	TIGRFAMs:TIGR01146	UniParc:UPI0001A833F7	RefSeq:XP_002468280.1
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr1:-:73313263..73317085

Molecular Weight (calculated)

35714.1 Da

IEP (calculated)

9.560

GRAVY (calculated)

-0.173

Length

330 amino acids

Sequence
(BLAST)

001: MAMAALRREG RRILLSPTVP NPSPAAASAA VTRSSAISQP EMAPLGARSI STQVVRNRMK SVKNIQKITK AMKMVAASKL RAVQTRTENS RGLWEPFTAL
101: LGDAPSVDVK KNVIVAITSD KGLCGGINST SVKVSRALHK LTSGPEKESK FVILGEKGKV QLVRDSRNSI EMTVTELQKN PINYTQIAVL ADDILKNVEY
201: DALRVIFNKF HSVISFKPTM VTILSPEVAE KESEAGGKMG DLDSYEIEGG ETKSEILQNL AEFQFSCVLY NGALENACSE LGARMSAMDS SSRNAGDMLD
301: RLTLTYNRTR QASITTELIE IISGASALEG

Best Arabidopsis Sequence Match ( AT2G33040.1 )
(BLAST)

001: MAMAVFRREG RRLLPSIAAR PIAAIRSPLS SDQEEGLLGV RSISTQVVRN RMKSVKNIQK ITKAMKMVAA SKLRAVQGRA ENSRGLWQPF TALLGDNPSI
101: DVKKSVVVTL SSDKGLCGGI NSTVVKVSRA LYKLNAGPEK EVQFVIVGEK AKAIMFRDSK NDIVLSVTEL NKNPLNYAQV SVLADDILKN VEFDALRIVY
201: NKFHSVVAFL PTVSTVLSPE IIEKESEIGG KLGELDSYEI EGGETKGEIL QNLAEFQFSC VMFNAVLENA CSEMGARMSA MDSSSRNAGE MLDRLTLTYN
301: RTRQASITTE LIEIISGASA LEAAK

Arabidopsis Description

ATPCATP synthase subunit gamma, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q96250]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.