Factsheet for Zm00001d028207_P001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid, cytosol

Predictor Summary:

cytosol 1
mitochondrion 2
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, mitochondrion, plastid
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER95278	Sorghum	mitochondrion	71.2	82.42
Zm00001d048091_P002	Maize	mitochondrion	71.2	82.42
Os10t0320400-01	Rice	mitochondrion	69.63	82.1
HORVU1Hr1G031600.1	Barley	plasma membrane	68.59	80.37
TraesCS1A01G138800.1	Wheat	golgi, unclear	68.59	80.37
TraesCS1B01G148500.1	Wheat	mitochondrion	68.59	80.37
TraesCS1D01G132700.1	Wheat	golgi, unclear	68.32	80.06
GSMUA_Achr9P07120_001	Banana	mitochondrion	65.18	77.09
Zm00001d021620_P001	Maize	plastid	21.47	22.84
Zm00001d006475_P001	Maize	cytosol, mitochondrion	13.61	22.32
Zm00001d044380_P001	Maize	cytosol	6.02	13.94
Zm00001d010316_P001	Maize	cytosol	2.09	10.67

Protein Annotations

Gene3D:1.10.287.80	MapMan:2.4.6.2.3	Gene3D:3.40.1380.10	UniProt:A0A1D6JT13	InterPro:ATP_synth_F1_ATPase_gsu	InterPro:ATP_synth_F1_gsu
InterPro:ATP_synth_F1_gsu_CS	GO:GO:0003674	GO:GO:0003824	GO:GO:0005215	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0006139	GO:GO:0006810	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0015986	GO:GO:0016020	GO:GO:0016787	GO:GO:0045261	GO:GO:0046933
GO:GO:0099132	ProteinID:ONL95023.1	PFAM:PF00231	PRINTS:PR00126	ScanProsite:PS00153	PANTHER:PTHR11693
PANTHER:PTHR11693:SF26	SUPFAM:SSF52943	TIGRFAMs:TIGR01146	UniParc:UPI000842F660	EnsemblPlantsGene:Zm00001d028207	EnsemblPlants:Zm00001d028207_P001
EnsemblPlants:Zm00001d028207_T001	SEG:seg	:	:	:	:

Description

ATP synthase subunit gamma mitochondrial

Coordinates

chr1:+:26334264..26346936

Molecular Weight (calculated)

41349.8 Da

IEP (calculated)

8.873

GRAVY (calculated)

-0.198

Length

382 amino acids

Sequence
(BLAST)

001: MFAGFATHFS PRLPQHGPYG KEREGGSGID RGKPSLCFRD NSGDAMAMAA LRREGRRLLL APTVPNPSSA AASAAVTRSS AMSQPAGVCI CLTCTVRNRM
101: KSIKNIQKIT KAMKMVAASK LRAVQTRTEN SRGLWQPFTA LLGDTPSMYI FFCFDLTGVD VKKNVIVAIT SDKGLCGGIN STSVKVSRAL HKLTSGPEKE
201: SKYVILGEKG KVQLLRDSKN SIEMTASELQ KNPINYTQIA VLADDILKNV EYDALRVIFN KFHSVISFKP TMVTILSPEV AEKEAEAGGK TGDLDSYEIE
301: GGETKAEILQ NLAEFQFSCV MYNGALENAC SELGARMSAM DSSSRNAGDM LDRLTLTYNR TRQASITTEL TEIISGASAL EG

Best Arabidopsis Sequence Match ( AT2G33040.1 )
(BLAST)

001: MAMAVFRREG RRLLPSIAAR PIAAIRSPLS SDQEEGLLGV RSISTQVVRN RMKSVKNIQK ITKAMKMVAA SKLRAVQGRA ENSRGLWQPF TALLGDNPSI
101: DVKKSVVVTL SSDKGLCGGI NSTVVKVSRA LYKLNAGPEK EVQFVIVGEK AKAIMFRDSK NDIVLSVTEL NKNPLNYAQV SVLADDILKN VEFDALRIVY
201: NKFHSVVAFL PTVSTVLSPE IIEKESEIGG KLGELDSYEI EGGETKGEIL QNLAEFQFSC VMFNAVLENA CSEMGARMSA MDSSSRNAGE MLDRLTLTYN
301: RTRQASITTE LIEIISGASA LEAAK

Arabidopsis Description

ATPCATP synthase subunit gamma, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q96250]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.