Factsheet for Zm00001d010316_P001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d044380_P001	Maize	cytosol	92.0	41.82
VIT_17s0000g07300.t01	Wine grape	mitochondrion	21.33	4.97
PGSC0003DMT400063336	Potato	mitochondrion	20.0	4.63
Solyc03g115110.2.1	Tomato	plastid	18.67	4.32
Bra005531.1-P	Field mustard	mitochondrion	18.67	4.31
CDY17130	Canola	mitochondrion	17.33	4.0
CDY19433	Canola	mitochondrion	17.33	4.0
Zm00001d021620_P001	Maize	plastid	18.67	3.9
CDY37753	Canola	mitochondrion	13.33	3.89
Zm00001d006475_P001	Maize	cytosol, mitochondrion	12.0	3.86
KRH54686	Soybean	mitochondrion	16.0	3.7
CDX79484	Canola	mitochondrion	16.0	3.69
CDX84716	Canola	mitochondrion	16.0	3.69
Bra022908.1-P	Field mustard	mitochondrion	16.0	3.69
AT2G33040.1	Thale cress	mitochondrion	16.0	3.69
KRH63239	Soybean	mitochondrion	14.67	3.44
CDY23771	Canola	mitochondrion	14.67	3.43
Bra021826.1-P	Field mustard	mitochondrion	14.67	3.43
Zm00001d048091_P002	Maize	mitochondrion	14.67	3.33
Zm00001d028207_P001	Maize	cytosol, mitochondrion, plastid	10.67	2.09
CDY72042	Canola	cytosol	9.33	1.64
CDX88259	Canola	nucleus	5.33	0.92
Bra015765.1-P	Field mustard	nucleus	4.0	0.59
HORVU7Hr1G085110.1	Barley	cytosol	1.33	0.48

Protein Annotations

Gene3D:1.10.287.80	MapMan:35.1	UniProt:A0A1D6FQD9	ProteinID:AQK93840.1	InterPro:ATP_synth_F1_ATPase_gsu	InterPro:ATP_synth_F1_gsu
GO:GO:0003674	GO:GO:0003824	GO:GO:0005215	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0006139	GO:GO:0006810	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
GO:GO:0015986	GO:GO:0016020	GO:GO:0016787	GO:GO:0045261	GO:GO:0046933	GO:GO:0099132
PFAM:PF00231	PANTHER:PTHR11693	PANTHER:PTHR11693:SF23	SUPFAM:SSF52943	UniParc:UPI0008433AFE	EnsemblPlantsGene:Zm00001d010316
EnsemblPlants:Zm00001d010316_P001	EnsemblPlants:Zm00001d010316_T001	SEG:seg	:	:	:

Description

ATP synthase gamma chain 1 chloroplastic

Coordinates

chr8:-:109290003..109290230

Molecular Weight (calculated)

8464.4 Da

IEP (calculated)

10.225

GRAVY (calculated)

-0.068

Length

75 amino acids

Sequence
(BLAST)

1: MQHFSPVVQF EQDPVQILDT LLPLYLNSQL LRALQESLAS ELTARMSAMS SATDNAIKLH KNLSRRSILL LGRSR

Best Arabidopsis Sequence Match ( AT1G15700.1 )
(BLAST)

001: MTGSISTSWL LSSPSNSNSA SSSESYSFIA TLKPVRYYPF QSLTPNRISS RSPLPSIQIR AGIRELRERI DSVKNTQKIT EAMRLVAAAR VRRAQDAVIK
101: GRPFTETLVE ILYSINQSAQ LEDIDFPLSI VRPVKRVALV VVTGDKGLCG GFNNAVTKKA TLRVQELKQR GIDCVVISVG KKGNAYFSRR DEFDVDKCIE
201: GGGVFPTTKE AQVIADDVFS LFVSEEVDKV ELVYTKFVSL VKSDPVIHTL LPLSMKGESC DVKGECVDAI EDEMFRLTSK DGKLAVERTK LEVEKPEISP
301: LMQFEQDPVQ ILDAMMPLYL NSQILRALQE SLASELASRM NAMSNATDNA VELKKNLTMA YNRARQAKIT GELLEIVAGA EALRES

Arabidopsis Description

ATPC2ATP synthase gamma chain 2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q01909]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.