Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- mitochondrion 10
Predictors | GFP | MS/MS | Papers |
---|---|---|---|
plastid:
20363867
plastid: 22908117 plastid: 26371478 unclear: 26455813 nucleus: 28394025 endoplasmic reticulum: 29145071 |
msms PMID:
28394025
doi
Cell and Molecular Sciences, JHI, Invergowrie, Dundee, DD2 5DA, UK., Division of Plant Science, School of Life Sciences, University of Dundee at the James Hutton Institute (JHI), Invergowrie, Dundee, DD2 5DA, UK., Dundee Effector Consortium, JHI, Invergowrie, Dundee, DD2 5DA, UK., Section of Population Genetics, Technische Universität München, 85354, Freising, Germany., Wellcome Trust Centre for Gene Regulation and Expression, School of Life Sciences, University of Dundee, Dow Street, Dundee, DD1 5EH, UK.
msms PMID:
22908117
doi
Université de Toulouse, Institut National Polytechnique-Ecole Nationale Supérieure Agronomique de Toulouse, Génomique et Biotechnologie des Fruits, Castanet-Tolosan F-31326, France.
msms PMID:
20363867
doi
Université de Toulouse, INP-ENSA Toulouse, Génomique et Biotechnologie des Fruits, Avenue de l'Agrobiopole BP 32607, F-31326 Castanet-Tolosan, France.
msms PMID:
26371478
doi
Faculty of Agriculture, Shizuoka University, Shizuoka city, Shizuoka, Japan., Faculty of Science, Japan Woman's University, Bunkyo-ku, Tokyo, Japan., Instrumental Research Support Office, Research Institute of Green Science and Technology, Shizuoka University, Shizuoka city, Shizuoka, Japan., The Plant Science Education Unit, Nara Institute of Science and Technology, Ikoma city, Nara, Japan.
msms PMID:
29145071
doi
Departamento de Microbiología del Suelo y Sistemas Simbióticos, Estación Experimental del Zaidín (EEZ-CSIC), Profesor Albareda 1, 18008 Granada, Spain. Electronic address: pablo.ibort@eez.csic.es., Departamento de Microbiología del Suelo y Sistemas Simbióticos, Estación Experimental del Zaidín (EEZ-CSIC), Profesor Albareda 1, 18008 Granada, Spain. Electronic address: raroca@eez.csic.es., United Graduate School of Agricultural Sciences, Iwate University, Morioka, Iwate 020-8550, Japan; Cryobiofrontier Research Center, Faculty of Agriculture, Iwate University, 3-18-8 Ueda, Morioka, Iwate 020-8550, Japan. Electronic address: u0414004@iwate-u.ac.jp., United Graduate School of Agricultural Sciences, Iwate University, Morioka, Iwate 020-8550, Japan; Cryobiofrontier Research Center, Faculty of Agriculture, Iwate University, 3-18-8 Ueda, Morioka, Iwate 020-8550, Japan. Electronic address: uemura@iwate-u.ac.jp.
msms PMID:
26455813
doi
Goethe University, Department of Biosciences, Molecular Cell Biology of Plants, Frankfurt/Main, Germany., Goethe University, Department of Biosciences, Molecular Cell Biology of Plants, Frankfurt/Main, Germany; SPOT-ITN Consortium., Goethe University, Department of Biosciences, Molecular Cell Biology of Plants, Frankfurt/Main, Germany; SPOT-ITN Consortium; Goethe University, Cluster of Excellence Frankfurt, Frankfurt/Main, Germany; Goethe University, Buchmann Institute of Molecular Life Sciences, Frankfurt/Main, Germany. Electronic address: schleiff@bio.uni-frankfurt.de., SPOT-ITN Consortium; University of Vienna, Department of Ecogenomics and Systems biology, Vienna, Austria., University of Vienna, Department of Ecogenomics and Systems biology, Vienna, Austria; School of Biotechnology and Bioinformatics, D.Y. Patil University, Mumbai, India.
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
PGSC0003DMT400063336 | Potato | mitochondrion | 92.28 | 92.28 |
KRH63239 | Soybean | mitochondrion | 81.48 | 82.5 |
VIT_17s0000g07300.t01 | Wine grape | mitochondrion | 81.79 | 82.3 |
KRH54686 | Soybean | mitochondrion | 80.56 | 80.56 |
CDY23771 | Canola | mitochondrion | 76.23 | 76.95 |
Bra021826.1-P | Field mustard | mitochondrion | 75.93 | 76.64 |
GSMUA_Achr9P07120_001 | Banana | mitochondrion | 75.93 | 76.16 |
AT2G33040.1 | Thale cress | mitochondrion | 76.23 | 76.0 |
CDX79484 | Canola | mitochondrion | 75.93 | 75.69 |
CDX84716 | Canola | mitochondrion | 75.93 | 75.69 |
CDY19433 | Canola | mitochondrion | 75.62 | 75.38 |
Bra005531.1-P | Field mustard | mitochondrion | 75.31 | 75.08 |
CDY17130 | Canola | mitochondrion | 75.31 | 75.08 |
Bra022908.1-P | Field mustard | mitochondrion | 75.31 | 75.08 |
TraesCS1A01G138800.1 | Wheat | golgi, unclear | 75.0 | 74.54 |
CDY37753 | Canola | mitochondrion | 58.95 | 74.32 |
TraesCS1B01G148500.1 | Wheat | mitochondrion | 74.69 | 74.23 |
TraesCS1D01G132700.1 | Wheat | golgi, unclear | 74.69 | 74.23 |
Os10t0320400-01 | Rice | mitochondrion | 74.07 | 74.07 |
EER95278 | Sorghum | mitochondrion | 74.38 | 73.03 |
HORVU7Hr1G085110.1 | Barley | cytosol | 32.72 | 51.21 |
CDX88259 | Canola | nucleus | 31.79 | 23.79 |
Solyc02g080540.1.1 | Tomato | plastid | 27.16 | 23.34 |
CDY72042 | Canola | cytosol | 30.25 | 22.95 |
Solyc12g005060.1.1 | Tomato | plastid | 24.38 | 22.64 |
Bra015765.1-P | Field mustard | nucleus | 31.48 | 20.16 |
Zm00001d010316_P001 | Maize | cytosol | 4.32 | 18.67 |
Zm00001d044380_P001 | Maize | cytosol | 8.33 | 16.36 |
Protein Annotations
Gene3D:1.10.287.80 | MapMan:2.4.6.2.3 | Gene3D:3.40.1380.10 | InterPro:ATP_synth_F1_ATPase_gsu | InterPro:ATP_synth_F1_gsu | InterPro:ATP_synth_F1_gsu_CS |
GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005215 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
GO:GO:0006139 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
GO:GO:0015986 | GO:GO:0016020 | GO:GO:0016787 | GO:GO:0045261 | GO:GO:0046933 | GO:GO:0099132 |
UniProt:K4BL13 | HAMAP:MF_00815 | PFAM:PF00231 | PIRSF:PIRSF039089 | PRINTS:PR00126 | ScanProsite:PS00153 |
PANTHER:PTHR11693 | PANTHER:PTHR11693:SF26 | SUPFAM:SSF52943 | EnsemblPlantsGene:Solyc03g115110.2 | EnsemblPlants:Solyc03g115110.2.1 | TIGRFAMs:TIGR01146 |
UniParc:UPI0002768787 | : | : | : | : | : |
Description
No Description!
Coordinates
chr3:-:64915129..64919553
Molecular Weight (calculated)
35575.0 Da
IEP (calculated)
9.316
GRAVY (calculated)
-0.204
Length
324 amino acids
Sequence
(BLAST)
(BLAST)
001: MAMAALRREG RRFATPLISP NPATVFRSSI IPSEEPVLSG VRCISTQVVR NRMKSVKNIQ KITKAMKMVA ASKLRAIQTR AENSRGLWQP FTALLGDTPS
101: IDVKKNVIVT ISADKGLCGG INSTSVKISR AMHKLNSGPD KENKYVVLGE KAKAQLVRDS KKDIELVMTE LQKNPLNYTQ VSVMADDILK NVEFDALRIV
201: YNKFQSVVSF LPTVSTVLSP EVVEREAESG GKLGDLDLYE IEGAETKGEV LQNLTEFQFS CMMYNAVLEN ATSEQGARMS AMDSSSRNAG DMLDRLTLTY
301: NRTRQASITT ELIEIISGAS ALEG
101: IDVKKNVIVT ISADKGLCGG INSTSVKISR AMHKLNSGPD KENKYVVLGE KAKAQLVRDS KKDIELVMTE LQKNPLNYTQ VSVMADDILK NVEFDALRIV
201: YNKFQSVVSF LPTVSTVLSP EVVEREAESG GKLGDLDLYE IEGAETKGEV LQNLTEFQFS CMMYNAVLEN ATSEQGARMS AMDSSSRNAG DMLDRLTLTY
301: NRTRQASITT ELIEIISGAS ALEG
001: MAMAVFRREG RRLLPSIAAR PIAAIRSPLS SDQEEGLLGV RSISTQVVRN RMKSVKNIQK ITKAMKMVAA SKLRAVQGRA ENSRGLWQPF TALLGDNPSI
101: DVKKSVVVTL SSDKGLCGGI NSTVVKVSRA LYKLNAGPEK EVQFVIVGEK AKAIMFRDSK NDIVLSVTEL NKNPLNYAQV SVLADDILKN VEFDALRIVY
201: NKFHSVVAFL PTVSTVLSPE IIEKESEIGG KLGELDSYEI EGGETKGEIL QNLAEFQFSC VMFNAVLENA CSEMGARMSA MDSSSRNAGE MLDRLTLTYN
301: RTRQASITTE LIEIISGASA LEAAK
101: DVKKSVVVTL SSDKGLCGGI NSTVVKVSRA LYKLNAGPEK EVQFVIVGEK AKAIMFRDSK NDIVLSVTEL NKNPLNYAQV SVLADDILKN VEFDALRIVY
201: NKFHSVVAFL PTVSTVLSPE IIEKESEIGG KLGELDSYEI EGGETKGEIL QNLAEFQFSC VMFNAVLENA CSEMGARMSA MDSSSRNAGE MLDRLTLTYN
301: RTRQASITTE LIEIISGASA LEAAK
Arabidopsis Description
ATPCATP synthase subunit gamma, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q96250]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.