Factsheet for PGSC0003DMT400063336

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 10

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc03g115110.2.1	Tomato	plastid	92.28	92.28
KRH63239	Soybean	mitochondrion	81.48	82.5
VIT_17s0000g07300.t01	Wine grape	mitochondrion	80.86	81.37
KRH54686	Soybean	mitochondrion	81.17	81.17
Bra021826.1-P	Field mustard	mitochondrion	77.47	78.19
CDY23771	Canola	mitochondrion	77.47	78.19
GSMUA_Achr9P07120_001	Banana	mitochondrion	77.16	77.4
AT2G33040.1	Thale cress	mitochondrion	77.16	76.92
CDY19433	Canola	mitochondrion	76.85	76.62
Bra005531.1-P	Field mustard	mitochondrion	76.54	76.31
CDX84716	Canola	mitochondrion	76.54	76.31
CDX79484	Canola	mitochondrion	76.54	76.31
CDY17130	Canola	mitochondrion	76.54	76.31
Bra022908.1-P	Field mustard	mitochondrion	75.93	75.69
Os10t0320400-01	Rice	mitochondrion	75.0	75.0
EER95278	Sorghum	mitochondrion	76.23	74.85
TraesCS1B01G148500.1	Wheat	mitochondrion	75.31	74.85
CDY37753	Canola	mitochondrion	59.26	74.71
TraesCS1A01G138800.1	Wheat	golgi, unclear	75.0	74.54
TraesCS1D01G132700.1	Wheat	golgi, unclear	75.0	74.54
HORVU7Hr1G085110.1	Barley	cytosol	32.72	51.21
CDX88259	Canola	nucleus	32.72	24.48
PGSC0003DMT400071659	Potato	plastid	26.54	23.76
CDY72042	Canola	cytosol	31.17	23.65
PGSC0003DMT400042499	Potato	extracellular, plastid	26.85	23.08
Zm00001d010316_P001	Maize	cytosol	4.63	20.0
Bra015765.1-P	Field mustard	nucleus	31.17	19.96
Zm00001d044380_P001	Maize	cytosol	8.64	16.97

Protein Annotations

Gene3D:1.10.287.80	EntrezGene:102577433	MapMan:2.4.6.2.3	Gene3D:3.40.1380.10	ProteinID:AAC04688	ProteinID:AAC04688.1
EMBL:AF023858	InterPro:ATP_synth_F1_ATPase_gsu	InterPro:ATP_synth_F1_gsu	InterPro:ATP_synth_F1_gsu_CS	GO:GO:0003674	GO:GO:0003824
GO:GO:0005215	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0006139	GO:GO:0006810
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0015986	GO:GO:0016020
GO:GO:0016787	GO:GO:0045261	GO:GO:0046933	GO:GO:0099132	UniProt:M1CAI4	HAMAP:MF_00815
PFAM:PF00231	EnsemblPlantsGene:PGSC0003DMG400024638	PGSC:PGSC0003DMG400024638	EnsemblPlants:PGSC0003DMT400063336	PIRSF:PIRSF039089	PRINTS:PR00126
ScanProsite:PS00153	PANTHER:PTHR11693	PANTHER:PTHR11693:SF26	SUPFAM:SSF52943	TIGRFAMs:TIGR01146	UniParc:UPI0002950DDE
RefSeq:XP_006345126.1	:	:	:	:	:

Description

ATP synthase subunit gamma, mitochondrial [Source:PGSC_GENE;Acc:PGSC0003DMG400024638]

Coordinates

chr3:-:55048871..55053448

Molecular Weight (calculated)

35568.0 Da

IEP (calculated)

9.316

GRAVY (calculated)

-0.205

Length

324 amino acids

Sequence
(BLAST)

001: MAMAALRREG RRFATPLISP NPANVLRSSL IPSEEPVLSG VRCISTQVVR NRMKSVKNIQ KITKAMKMVA ASKLRAIQTR AENSRGLWQP FTALLGDTPS
101: IDVKKNVIVT ISADKGLCGG INSTSVKISR AMHKLNSGPD KENKYVVLGE KAKAQLVRDS KKDIELVMTE LQKNPLNYTQ VSVMADDILK NVEFDALRIV
201: YNKFQSVVSF LPTVSTVLSP EVVEREAESG GKLGDLDLYE IEGAETKAEV LQNLTEFQFS CMMYNAVLEN ATSEQGARMS AMDSSSRNAG DMLDRLTLTY
301: NRTRQASITT ELIEIISGAS ALEG

Best Arabidopsis Sequence Match ( AT2G33040.1 )
(BLAST)

001: MAMAVFRREG RRLLPSIAAR PIAAIRSPLS SDQEEGLLGV RSISTQVVRN RMKSVKNIQK ITKAMKMVAA SKLRAVQGRA ENSRGLWQPF TALLGDNPSI
101: DVKKSVVVTL SSDKGLCGGI NSTVVKVSRA LYKLNAGPEK EVQFVIVGEK AKAIMFRDSK NDIVLSVTEL NKNPLNYAQV SVLADDILKN VEFDALRIVY
201: NKFHSVVAFL PTVSTVLSPE IIEKESEIGG KLGELDSYEI EGGETKGEIL QNLAEFQFSC VMFNAVLENA CSEMGARMSA MDSSSRNAGE MLDRLTLTYN
301: RTRQASITTE LIEIISGASA LEAAK

Arabidopsis Description

ATPCATP synthase subunit gamma, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q96250]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.