Factsheet for Zm00001d048091_P002

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
mitochondrion 7

Predictors

GFP

MS/MS

Papers

extracellular: 20408568
plastid: 22065420
plastid: 23198870
mitochondrion: 27297264
plasma membrane: 27341663
mitochondrion: 29575040

msms PMID: 27297264 doi

D Dahal, KJ Newton, BP Mooney

Division of Biological Sciences, ‡Department of Biochemistry, and §The Charles W Gehrke Proteomics Center, University of Missouri , Columbia, Missouri 65211, United States.

msms PMID: 23198870 doi

M Huang, G Friso, K Nishimura, X Qu, PD Olinares, W Majeran, Q Sun, KJ van Wijk

Department of Plant Biology, Cornell University, Ithaca, New York 14853, United States.

msms PMID: 27341663 doi

P Voothuluru, JC Anderson, RE Sharp, SC Peck

Bond Life Sciences Center, University of Missouri, Columbia, MO, 65211, USA., Division of Biochemistry, University of Missouri, Columbia, MO, 65211, USA., Division of Plant Sciences, University of Missouri, Columbia, MO, 65211, USA., Interdisciplinary Plant Group, University of Missouri, Columbia, MO, 65211, USA.

msms PMID: 29575040 doi

WQ Wang, Y Wang, Q Zhang, IM Møller, SQ Song

Department of Molecular Biology and Genetics, Aarhus University, DK-4200 Slagelse, Denmark., Key Laboratory of Plant Molecular Physiology, Institute of Botany, the Chinese Academy of Sciences, Beijing 100093, China., Key Laboratory of Plant Resources and Beijing Botanical Garden, Institute of Botany, the Chinese Academy of Sciences, Beijing 100093, China.

msms PMID: 20408568 doi

W Ma, N Muthreich, C Liao, M Franz-Wachtel, W Schütz, F Zhang, F Hochholdinger, C Li

Department of Plant Nutrition, China Agricultural University, Beijing, PR China.

msms PMID: 22065420 doi

W Majeran, G Friso, Y Asakura, X Qu, M Huang, L Ponnala, KP Watkins, A Barkan, KJ van Wijk

Department of Plant Biology, Cornell University, Ithaca, New York 14853, USA.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER95278	Sorghum	mitochondrion	94.55	94.55
Os10t0320400-01	Rice	mitochondrion	84.85	86.42
HORVU1Hr1G031600.1	Barley	plasma membrane	83.94	84.97
TraesCS1B01G148500.1	Wheat	mitochondrion	83.64	84.66
TraesCS1A01G138800.1	Wheat	golgi, unclear	83.33	84.36
TraesCS1D01G132700.1	Wheat	golgi, unclear	83.33	84.36
GSMUA_Achr9P07120_001	Banana	mitochondrion	81.21	82.97
Zm00001d028207_P001	Maize	cytosol, mitochondrion, plastid	82.42	71.2
Zm00001d021620_P001	Maize	plastid	26.06	23.96
Zm00001d006475_P001	Maize	cytosol, mitochondrion	16.67	23.61
Zm00001d044380_P001	Maize	cytosol	7.88	15.76
Zm00001d010316_P001	Maize	cytosol	3.33	14.67

Protein Annotations

Gene3D:1.10.287.80	EntrezGene:100274172	MapMan:2.4.6.2.3	Gene3D:3.40.1380.10	ProteinID:AQL08709.1	InterPro:ATP_synth_F1_ATPase_gsu
InterPro:ATP_synth_F1_gsu	InterPro:ATP_synth_F1_gsu_CS	GO:GO:0003674	GO:GO:0003824	GO:GO:0005215	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0006139	GO:GO:0006754	GO:GO:0006810	GO:GO:0006811
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0015986	GO:GO:0015992
GO:GO:0016020	GO:GO:0016787	GO:GO:0045261	GO:GO:0046933	GO:GO:0099132	UniProt:K7WFV1
PFAM:PF00231	PIRSF:PIRSF039089	PRINTS:PR00126	ScanProsite:PS00153	PANTHER:PTHR11693	PANTHER:PTHR11693:SF26
SUPFAM:SSF52943	TIGRFAMs:TIGR01146	UniParc:UPI000221E0BB	EnsemblPlantsGene:Zm00001d048091	EnsemblPlants:Zm00001d048091_P002	EnsemblPlants:Zm00001d048091_T002
SEG:seg	:	:	:	:	:

Description

ATP synthase subunit gamma mitochondrial

Coordinates

chr9:-:149914247..149918402

Molecular Weight (calculated)

35717.0 Da

IEP (calculated)

9.520

GRAVY (calculated)

-0.201

Length

330 amino acids

Sequence
(BLAST)

001: MAMAALRREG RRLILSSTVP NPSLAAASSA VTRSSAVSQP EMAPLGARSI STQIVRNRMK SVRNIQKITK AMKMVAASKL RAVQTRTENS RGLWQPFTAL
101: LGDAPSVDVK KNVIVAITSD KGLCGGINST SVKVSRALHK LTSGPEKETK YVILGEKGKV QLLRDSKDSI EMTATELQKN PINYTQVAVL ADDILKNVEY
201: DALRVIFNKF QSVISFKPTM VTILSPEVAE KESEAGGKMG DLDSYEIEGG ETKSEILQNL AEFQFSCVLY NGALENACSE LGARMSAMDS SSRNAGDMLD
301: RLTLTYNRTR QASITTELTE IISGASALEG

Best Arabidopsis Sequence Match ( AT2G33040.1 )
(BLAST)

001: MAMAVFRREG RRLLPSIAAR PIAAIRSPLS SDQEEGLLGV RSISTQVVRN RMKSVKNIQK ITKAMKMVAA SKLRAVQGRA ENSRGLWQPF TALLGDNPSI
101: DVKKSVVVTL SSDKGLCGGI NSTVVKVSRA LYKLNAGPEK EVQFVIVGEK AKAIMFRDSK NDIVLSVTEL NKNPLNYAQV SVLADDILKN VEFDALRIVY
201: NKFHSVVAFL PTVSTVLSPE IIEKESEIGG KLGELDSYEI EGGETKGEIL QNLAEFQFSC VMFNAVLENA CSEMGARMSA MDSSSRNAGE MLDRLTLTYN
301: RTRQASITTE LIEIISGASA LEAAK

Arabidopsis Description

ATPCATP synthase subunit gamma, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q96250]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.