Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 10
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| Os09t0133600-01 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT4G04640.1 | Os09t0133600-01 | AT4G22240.1 | 24937144 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d021620_P001 | Maize | plastid | 92.18 | 91.92 |
| KXG36319 | Sorghum | plastid | 91.62 | 91.11 |
| Zm00001d006475_P001 | Maize | cytosol, mitochondrion | 58.38 | 89.7 |
| TraesCS2B01G273900.1 | Wheat | plastid | 86.31 | 86.31 |
| TraesCS2A01G223600.1 | Wheat | plastid | 86.31 | 86.31 |
| TraesCS2D01G229600.1 | Wheat | plastid | 86.31 | 86.07 |
| GSMUA_Achr2P13970_001 | Banana | mitochondrion | 52.79 | 77.46 |
| KRH11433 | Soybean | nucleus, plastid | 74.58 | 71.2 |
| KRH20854 | Soybean | plastid | 74.02 | 70.67 |
| CDY21312 | Canola | plastid | 72.91 | 69.79 |
| CDX90874 | Canola | plastid | 72.91 | 69.79 |
| Bra000802.1-P | Field mustard | plastid | 72.91 | 69.79 |
| CDY16654 | Canola | plastid | 72.91 | 69.6 |
| AT4G04640.1 | Thale cress | plastid | 72.35 | 69.44 |
| Bra029511.1-P | Field mustard | plastid | 72.63 | 69.33 |
| Solyc02g080540.1.1 | Tomato | plastid | 72.91 | 69.23 |
| PGSC0003DMT400042499 | Potato | extracellular, plastid | 72.63 | 68.97 |
| CDX94569 | Canola | plastid | 72.07 | 68.8 |
| Bra018503.1-P | Field mustard | plastid | 69.55 | 49.4 |
| EES05204 | Sorghum | plastid | 21.79 | 36.62 |
| Os10t0320400-01 | Rice | mitochondrion | 25.14 | 27.78 |
| Os07t0513100-01 | Rice | mitochondrion, nucleus | 12.57 | 4.56 |
Protein Annotations
| MapMan:1.1.9.2.3 | EntrezGene:4343366 | EMBL:AK072104 | InterPro:ATP_synth_F1_ATPase_gsu | InterPro:ATP_synth_F1_gsu | InterPro:ATP_synth_F1_gsu_CS |
| ProteinID:BAC55768.1 | ProteinID:BAD31183.1 | ProteinID:BAF21682.1 | ProteinID:BAT01729.1 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0005215 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0006091 |
| GO:GO:0006139 | GO:GO:0006754 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009507 | GO:GO:0009534 | GO:GO:0009535 | GO:GO:0009536 | GO:GO:0009579 | GO:GO:0009772 |
| GO:GO:0009941 | GO:GO:0009987 | GO:GO:0015979 | GO:GO:0015986 | GO:GO:0016020 | GO:GO:0016787 |
| GO:GO:0045261 | GO:GO:0046933 | GO:GO:0099132 | HAMAP:MF_00815 | EnsemblPlantsGene:Os07g0513000 | EnsemblPlants:Os07t0513000-01 |
| PFAM:PF00231 | PRINTS:PR00126 | ScanProsite:PS00153 | PANTHER:PTHR11693 | PANTHER:PTHR11693:SF23 | UniProt:Q84NW1 |
| SUPFAM:SSF52943 | TIGRFAMs:TIGR01146 | UniParc:UPI00000046A2 | RefSeq:XP_015646852.1 | SEG:seg | : |
Description
Similar to ATP synthase gamma chain, chloroplast (EC 3.6.1.34) (Fragment). (Os07t0513000-01);Similar to ATP synthase gamma chain, chloroplast (EC 3.6.1.34) (Fragment). (Os07t0513000-02)
Coordinates
chr7:-:19656083..19657560
Molecular Weight (calculated)
39709.2 Da
IEP (calculated)
8.461
GRAVY (calculated)
-0.091
Length
358 amino acids
Sequence
(BLAST)
(BLAST)
001: MSCSHLSTAW SSSALATRRR SAPSCGSSGR LQVVRCSLRE LRSRIDSVRN TQKITEAMKL VAAAKVRRAQ EAVVSSRPFS EALVEVLYNM NQEIQTEDID
101: LPLTRIRPVK KVALVVLTGE RGLCGSFNNN VLKKAETRIE ELKQLGLEYT VVSVGKKGNA YFIRRPFIPT ERTLEVNGIP TVKDSQSICD LVYSLFVSEA
201: VDKVELLYSK FVSLVRSDPI IQTLLPMSPK GEICDINGVC VDATEDELFR LTTKEGKLTV EREKVKIETQ PFSPVVQFEQ DPVQILDALL PLYLNSQILR
301: ALQESLASEL AARMSAMSSA TDNAIELRKN LSMVYNRQRQ AKITGEILEI VAGADALA
101: LPLTRIRPVK KVALVVLTGE RGLCGSFNNN VLKKAETRIE ELKQLGLEYT VVSVGKKGNA YFIRRPFIPT ERTLEVNGIP TVKDSQSICD LVYSLFVSEA
201: VDKVELLYSK FVSLVRSDPI IQTLLPMSPK GEICDINGVC VDATEDELFR LTTKEGKLTV EREKVKIETQ PFSPVVQFEQ DPVQILDALL PLYLNSQILR
301: ALQESLASEL AARMSAMSSA TDNAIELRKN LSMVYNRQRQ AKITGEILEI VAGADALA
001: MACSNLTTMW VSSKPSLSAD SSSLSFRSVL KCPTNTSSPP SRASSVSPLQ ASLRELRDRI DSVKNTQKIT EAMKLVAAAK VRRAQEAVVN GRPFSETLVE
101: VLYNINEQLQ TDDVDVPLTK VRPVKKVALV VVTGDRGLCG GFNNFIIKKA EARIKELKGL GLEYTVISVG KKGNSYFLRR PYIPVDKYLE AGTLPTAKEA
201: QAVADDVFSL FISEEVDKVE LLYTKFVSLV KSEPVIHTLL PLSPKGEICD INGTCVDAAE DEFFRLTTKE GKLTVERETF RTPTADFSPI LQFEQDPVQI
301: LDALLPLYLN SQILRALQES LASELAARMS AMSSASDNAS DLKKSLSMVY NRKRQAKITG EILEIVAGAN AQV
101: VLYNINEQLQ TDDVDVPLTK VRPVKKVALV VVTGDRGLCG GFNNFIIKKA EARIKELKGL GLEYTVISVG KKGNSYFLRR PYIPVDKYLE AGTLPTAKEA
201: QAVADDVFSL FISEEVDKVE LLYTKFVSLV KSEPVIHTLL PLSPKGEICD INGTCVDAAE DEFFRLTTKE GKLTVERETF RTPTADFSPI LQFEQDPVQI
301: LDALLPLYLN SQILRALQES LASELAARMS AMSSASDNAS DLKKSLSMVY NRKRQAKITG EILEIVAGAN AQV
Arabidopsis Description
ATPC1ATP synthase gamma chain 1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q01908]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.