Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus
Predictor Summary:
Predictor Summary:
- plastid 11
PPI
Inferred from Arabidopsis experimental PPI
Ath locusA | locusB | Ath locusB | Paper |
---|---|---|---|
AT4G04640.1 | KRH11500 | AT4G22240.1 | 24937144 |
AT4G04640.1 | KRH36517 | AT4G22240.1 | 24937144 |
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
KRH20854 | Soybean | plastid | 97.33 | 97.33 |
PGSC0003DMT400042499 | Potato | extracellular, plastid | 86.13 | 85.68 |
Solyc02g080540.1.1 | Tomato | plastid | 85.6 | 85.15 |
GSMUA_Achr2P13970_001 | Banana | mitochondrion | 55.2 | 84.84 |
AT4G04640.1 | Thale cress | plastid | 81.87 | 82.31 |
CDY16654 | Canola | plastid | 80.53 | 80.53 |
CDX94569 | Canola | plastid | 80.27 | 80.27 |
Bra029511.1-P | Field mustard | plastid | 79.73 | 79.73 |
Bra000802.1-P | Field mustard | plastid | 79.2 | 79.41 |
CDX90874 | Canola | plastid | 79.2 | 79.41 |
CDY21312 | Canola | plastid | 79.2 | 79.41 |
Zm00001d006475_P001 | Maize | cytosol, mitochondrion | 47.47 | 76.39 |
Zm00001d021620_P001 | Maize | plastid | 72.27 | 75.49 |
KXG36319 | Sorghum | plastid | 72.27 | 75.28 |
Os07t0513000-01 | Rice | plastid | 71.2 | 74.58 |
TraesCS2A01G223600.1 | Wheat | plastid | 66.93 | 70.11 |
TraesCS2B01G273900.1 | Wheat | plastid | 66.93 | 70.11 |
TraesCS2D01G229600.1 | Wheat | plastid | 66.93 | 69.92 |
KRH46189 | Soybean | plastid | 58.67 | 64.33 |
Bra018503.1-P | Field mustard | plastid | 76.27 | 56.75 |
EES05204 | Sorghum | plastid | 19.2 | 33.8 |
KRH54686 | Soybean | mitochondrion | 23.47 | 27.16 |
KRH63239 | Soybean | mitochondrion | 22.93 | 26.88 |
Protein Annotations
MapMan:1.1.9.2.3 | EMBL:ACUP02009209 | InterPro:ATP_synth_F1_ATPase_gsu | InterPro:ATP_synth_F1_gsu | InterPro:ATP_synth_F1_gsu_CS | EnsemblPlantsGene:GLYMA_15G107900 |
GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005215 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
GO:GO:0006139 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
GO:GO:0015986 | GO:GO:0016020 | GO:GO:0016787 | GO:GO:0045261 | GO:GO:0046933 | GO:GO:0099132 |
UniProt:I1MFH3 | ProteinID:KRH11432.1 | EnsemblPlants:KRH11433 | ProteinID:KRH11433 | ProteinID:KRH11433.1 | HAMAP:MF_00815 |
PFAM:PF00231 | PRINTS:PR00126 | ScanProsite:PS00153 | PANTHER:PTHR11693 | PANTHER:PTHR11693:SF23 | SUPFAM:SSF52943 |
TIGRFAMs:TIGR01146 | UniParc:UPI00023D26E2 | SEG:seg | : | : | : |
Description
hypothetical protein
Coordinates
chr15:+:8484079..8485970
Molecular Weight (calculated)
41332.0 Da
IEP (calculated)
7.071
GRAVY (calculated)
-0.073
Length
375 amino acids
Sequence
(BLAST)
(BLAST)
001: MSCSNLTMLV SSKPSLSDPS NLSFRSVLNP FQLPSQNPTS CTPSRSSTTQ IQCGLRELRT RIDSVKNTQK ITEAMKLVAA AKVRRAQEAV VNGRPFSETL
101: VEVLYNINEQ LLTEDVDIPL TKVRPVKKVA LVVVTGDRGL CGGFNNAIIK KAEARIRELK ELGLEFTVIS VGKKGNSYFI RRPYIPVDRF LEGGTLPTAK
201: EAQAIADDVF SLFVSEEVDK VELLYTKFVS LVKSDPVIHT LLPLSPKGEI CDVNGVCVDA AEDEFFRLTT KEGKLTVERD VVRTKTADFS PILQFEQDPV
301: QILDALLPLY LNSQVLRALQ ESLASELAAR MSAMSNATDN AIELKKNLSI VYNRERQAKI TGEILEIVAG ANALQ
101: VEVLYNINEQ LLTEDVDIPL TKVRPVKKVA LVVVTGDRGL CGGFNNAIIK KAEARIRELK ELGLEFTVIS VGKKGNSYFI RRPYIPVDRF LEGGTLPTAK
201: EAQAIADDVF SLFVSEEVDK VELLYTKFVS LVKSDPVIHT LLPLSPKGEI CDVNGVCVDA AEDEFFRLTT KEGKLTVERD VVRTKTADFS PILQFEQDPV
301: QILDALLPLY LNSQVLRALQ ESLASELAAR MSAMSNATDN AIELKKNLSI VYNRERQAKI TGEILEIVAG ANALQ
001: MACSNLTTMW VSSKPSLSAD SSSLSFRSVL KCPTNTSSPP SRASSVSPLQ ASLRELRDRI DSVKNTQKIT EAMKLVAAAK VRRAQEAVVN GRPFSETLVE
101: VLYNINEQLQ TDDVDVPLTK VRPVKKVALV VVTGDRGLCG GFNNFIIKKA EARIKELKGL GLEYTVISVG KKGNSYFLRR PYIPVDKYLE AGTLPTAKEA
201: QAVADDVFSL FISEEVDKVE LLYTKFVSLV KSEPVIHTLL PLSPKGEICD INGTCVDAAE DEFFRLTTKE GKLTVERETF RTPTADFSPI LQFEQDPVQI
301: LDALLPLYLN SQILRALQES LASELAARMS AMSSASDNAS DLKKSLSMVY NRKRQAKITG EILEIVAGAN AQV
101: VLYNINEQLQ TDDVDVPLTK VRPVKKVALV VVTGDRGLCG GFNNFIIKKA EARIKELKGL GLEYTVISVG KKGNSYFLRR PYIPVDKYLE AGTLPTAKEA
201: QAVADDVFSL FISEEVDKVE LLYTKFVSLV KSEPVIHTLL PLSPKGEICD INGTCVDAAE DEFFRLTTKE GKLTVERETF RTPTADFSPI LQFEQDPVQI
301: LDALLPLYLN SQILRALQES LASELAARMS AMSSASDNAS DLKKSLSMVY NRKRQAKITG EILEIVAGAN AQV
Arabidopsis Description
ATPC1ATP synthase gamma chain 1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q01908]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.