Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 9
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra029511.1-P | Field mustard | plastid | 91.96 | 91.47 |
| CDX94569 | Canola | plastid | 91.96 | 91.47 |
| CDY16654 | Canola | plastid | 91.96 | 91.47 |
| Bra000802.1-P | Field mustard | plastid | 88.74 | 88.5 |
| CDX90874 | Canola | plastid | 88.74 | 88.5 |
| CDY21312 | Canola | plastid | 88.74 | 88.5 |
| GSMUA_Achr2P13970_001 | Banana | mitochondrion | 54.42 | 83.2 |
| PGSC0003DMT400042499 | Potato | extracellular, plastid | 82.84 | 81.96 |
| KRH11433 | Soybean | nucleus, plastid | 82.31 | 81.87 |
| KRH20854 | Soybean | plastid | 82.31 | 81.87 |
| Solyc02g080540.1.1 | Tomato | plastid | 82.57 | 81.7 |
| Zm00001d006475_P001 | Maize | cytosol, mitochondrion | 45.84 | 73.39 |
| KXG36319 | Sorghum | plastid | 69.97 | 72.5 |
| Os07t0513000-01 | Rice | plastid | 69.44 | 72.35 |
| Zm00001d021620_P001 | Maize | plastid | 69.44 | 72.14 |
| TraesCS2A01G223600.1 | Wheat | plastid | 66.49 | 69.27 |
| TraesCS2B01G273900.1 | Wheat | plastid | 66.49 | 69.27 |
| TraesCS2D01G229600.1 | Wheat | plastid | 66.49 | 69.08 |
| Bra018503.1-P | Field mustard | plastid | 85.25 | 63.1 |
| AT1G15700.1 | Thale cress | plastid | 65.15 | 62.95 |
| EES05204 | Sorghum | plastid | 18.77 | 32.86 |
| AT2G33040.1 | Thale cress | mitochondrion | 26.01 | 29.85 |
Protein Annotations
| MapMan:1.1.9.2.3 | EntrezGene:825797 | UniProt:A0A178USQ7 | ProteinID:AAA32753.1 | ProteinID:AAD48955.1 | ProteinID:AEE82408.1 |
| EMBL:AF428422 | ArrayExpress:AT4G04640 | EnsemblPlantsGene:AT4G04640 | RefSeq:AT4G04640 | TAIR:AT4G04640 | RefSeq:AT4G04640-TAIR-G |
| EnsemblPlants:AT4G04640.1 | TAIR:AT4G04640.1 | Symbol:ATPC1 | InterPro:ATP_synth_F1_ATPase_gsu | InterPro:ATP_synth_F1_gsu | InterPro:ATP_synth_F1_gsu_CS |
| EMBL:AY065199 | EMBL:AY081505 | EMBL:AY088438 | Unigene:At.291 | ProteinID:CAB80829.1 | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0005215 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
| GO:GO:0006091 | GO:GO:0006139 | GO:GO:0006754 | GO:GO:0006810 | GO:GO:0006811 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009507 | GO:GO:0009534 | GO:GO:0009535 | GO:GO:0009536 |
| GO:GO:0009544 | GO:GO:0009579 | GO:GO:0009772 | GO:GO:0009941 | GO:GO:0009987 | GO:GO:0015979 |
| GO:GO:0015986 | GO:GO:0015992 | GO:GO:0016020 | GO:GO:0016787 | GO:GO:0030234 | GO:GO:0045261 |
| GO:GO:0046933 | GO:GO:0050790 | GO:GO:0099132 | HAMAP:MF_00815 | RefSeq:NP_567265.1 | ProteinID:OAO97076.1 |
| PFAM:PF00231 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 |
| PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0006339 | PO:PO:0007064 |
| PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007131 |
| PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009001 | PO:PO:0009005 | PO:PO:0009006 |
| PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 |
| PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 |
| PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 | PRINTS:PR00126 | ScanProsite:PS00153 |
| PANTHER:PTHR11693 | PANTHER:PTHR11693:SF23 | UniProt:Q01908 | SUPFAM:SSF52943 | TIGRFAMs:TIGR01146 | UniParc:UPI0000000D42 |
| SEG:seg | : | : | : | : | : |
Description
ATPC1ATP synthase gamma chain 1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q01908]
Coordinates
chr4:-:2350498..2352025
Molecular Weight (calculated)
40913.3 Da
IEP (calculated)
8.171
GRAVY (calculated)
-0.105
Length
373 amino acids
Sequence
(BLAST)
(BLAST)
001: MACSNLTTMW VSSKPSLSAD SSSLSFRSVL KCPTNTSSPP SRASSVSPLQ ASLRELRDRI DSVKNTQKIT EAMKLVAAAK VRRAQEAVVN GRPFSETLVE
101: VLYNINEQLQ TDDVDVPLTK VRPVKKVALV VVTGDRGLCG GFNNFIIKKA EARIKELKGL GLEYTVISVG KKGNSYFLRR PYIPVDKYLE AGTLPTAKEA
201: QAVADDVFSL FISEEVDKVE LLYTKFVSLV KSEPVIHTLL PLSPKGEICD INGTCVDAAE DEFFRLTTKE GKLTVERETF RTPTADFSPI LQFEQDPVQI
301: LDALLPLYLN SQILRALQES LASELAARMS AMSSASDNAS DLKKSLSMVY NRKRQAKITG EILEIVAGAN AQV
101: VLYNINEQLQ TDDVDVPLTK VRPVKKVALV VVTGDRGLCG GFNNFIIKKA EARIKELKGL GLEYTVISVG KKGNSYFLRR PYIPVDKYLE AGTLPTAKEA
201: QAVADDVFSL FISEEVDKVE LLYTKFVSLV KSEPVIHTLL PLSPKGEICD INGTCVDAAE DEFFRLTTKE GKLTVERETF RTPTADFSPI LQFEQDPVQI
301: LDALLPLYLN SQILRALQES LASELAARMS AMSSASDNAS DLKKSLSMVY NRKRQAKITG EILEIVAGAN AQV
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.