Factsheet for AT1G15700.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 9

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX83971	Canola	plastid	84.46	86.02
CDX96834	Canola	plastid	83.68	85.22
Bra016652.1-P	Field mustard	plastid	82.9	84.43
VIT_19s0090g00480.t01	Wine grape	mitochondrion	55.7	69.81
AT4G04640.1	Thale cress	plastid	62.95	65.15
KRH46189	Soybean	plastid	56.99	64.33
PGSC0003DMT400071659	Potato	plastid	59.59	63.54
Solyc12g005060.1.1	Tomato	plastid	55.18	61.03
AT2G33040.1	Thale cress	mitochondrion	23.06	27.38
Os07t0513100-01	Rice	mitochondrion, nucleus	11.92	4.66

Protein Annotations

MapMan:1.1.9.2.3	EntrezGene:838139	ProteinID:AAA32833.1	ProteinID:AAF82140.1	ProteinID:AEE29351.1	ArrayExpress:AT1G15700
EnsemblPlantsGene:AT1G15700	RefSeq:AT1G15700	TAIR:AT1G15700	RefSeq:AT1G15700-TAIR-G	EnsemblPlants:AT1G15700.1	TAIR:AT1G15700.1
Symbol:ATPC2	InterPro:ATP_synth_F1_ATPase_gsu	InterPro:ATP_synth_F1_gsu	InterPro:ATP_synth_F1_gsu_CS	EMBL:AY065255	EMBL:AY117311
Unigene:At.66944	ncoils:Coil	GO:GO:0003674	GO:GO:0003824	GO:GO:0005215	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006139	GO:GO:0006754	GO:GO:0006810
GO:GO:0006811	GO:GO:0007275	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009507
GO:GO:0009535	GO:GO:0009536	GO:GO:0009544	GO:GO:0009579	GO:GO:0009653	GO:GO:0009987
GO:GO:0015986	GO:GO:0015992	GO:GO:0016020	GO:GO:0016787	GO:GO:0030234	GO:GO:0045261
GO:GO:0046933	GO:GO:0050790	GO:GO:0099132	GO:GO:2000067	HAMAP:MF_00815	RefSeq:NP_173022.1
PFAM:PF00231	PO:PO:0000013	PO:PO:0000037	PO:PO:0000230	PO:PO:0000293	PO:PO:0001054
PO:PO:0001078	PO:PO:0001081	PO:PO:0001185	PO:PO:0004507	PO:PO:0007064	PO:PO:0007095
PO:PO:0007098	PO:PO:0007103	PO:PO:0007115	PO:PO:0007123	PO:PO:0007611	PO:PO:0007616
PO:PO:0008019	PO:PO:0009005	PO:PO:0009006	PO:PO:0009009	PO:PO:0009010	PO:PO:0009025
PO:PO:0009029	PO:PO:0009030	PO:PO:0009031	PO:PO:0009032	PO:PO:0009046	PO:PO:0009047
PO:PO:0009052	PO:PO:0020030	PO:PO:0020038	PO:PO:0020100	PO:PO:0020137	PO:PO:0025022
PO:PO:0025281	PRINTS:PR00126	ScanProsite:PS00153	PANTHER:PTHR11693	PANTHER:PTHR11693:SF23	UniProt:Q01909
SUPFAM:SSF52943	TIGRFAMs:TIGR01146	UniParc:UPI0000001791	SEG:seg	:	:

Description

ATPC2ATP synthase gamma chain 2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q01909]

Coordinates

chr1:-:5402569..5403818

Molecular Weight (calculated)

42681.5 Da

IEP (calculated)

7.109

GRAVY (calculated)

-0.153

Length

386 amino acids

Sequence
(BLAST)

001: MTGSISTSWL LSSPSNSNSA SSSESYSFIA TLKPVRYYPF QSLTPNRISS RSPLPSIQIR AGIRELRERI DSVKNTQKIT EAMRLVAAAR VRRAQDAVIK
101: GRPFTETLVE ILYSINQSAQ LEDIDFPLSI VRPVKRVALV VVTGDKGLCG GFNNAVTKKA TLRVQELKQR GIDCVVISVG KKGNAYFSRR DEFDVDKCIE
201: GGGVFPTTKE AQVIADDVFS LFVSEEVDKV ELVYTKFVSL VKSDPVIHTL LPLSMKGESC DVKGECVDAI EDEMFRLTSK DGKLAVERTK LEVEKPEISP
301: LMQFEQDPVQ ILDAMMPLYL NSQILRALQE SLASELASRM NAMSNATDNA VELKKNLTMA YNRARQAKIT GELLEIVAGA EALRES

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.