CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 9

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra016652.1-P	Field mustard	plastid	98.94	98.94
CDX83971	Canola	plastid	96.83	96.83
AT1G15700.1	Thale cress	plastid	85.22	83.68
VIT_19s0090g00480.t01	Wine grape	mitochondrion	56.99	70.13
KRH46189	Soybean	plastid	58.58	64.91
PGSC0003DMT400071659	Potato	plastid	61.21	64.09
CDY16654	Canola	plastid	63.32	64.0
CDX94569	Canola	plastid	63.06	63.73
CDX90874	Canola	plastid	62.8	63.64
CDY21312	Canola	plastid	62.8	63.64
Solyc12g005060.1.1	Tomato	plastid	56.73	61.6
CDY23771	Canola	mitochondrion	24.8	29.28
CDY17130	Canola	mitochondrion	24.8	28.92
CDY19433	Canola	mitochondrion	24.8	28.92
CDX79484	Canola	mitochondrion	24.54	28.62
CDX84716	Canola	mitochondrion	24.54	28.62
CDX97316	Canola	plastid	32.72	26.11
CDY37753	Canola	mitochondrion	16.62	24.51
CDY33548	Canola	cytosol, mitochondrion	6.33	19.05
CDX88260	Canola	nucleus	6.86	16.88
CDX88259	Canola	nucleus	14.78	12.93
CDY72042	Canola	cytosol	14.25	12.65
Os07t0513100-01	Rice	mitochondrion, nucleus	10.82	4.15

Protein Annotations

MapMan:1.1.9.2.3	GO:A0A078E805	InterPro:ATP_synth_F1_ATPase_gsu	InterPro:ATP_synth_F1_gsu	InterPro:ATP_synth_F1_gsu_CS	EnsemblPlants:CDX96834
ProteinID:CDX96834	ProteinID:CDX96834.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0005215	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0006139	GO:GO:0006810	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	GO:GO:0015986	GO:GO:0016020	GO:GO:0016787	GO:GO:0045261
GO:GO:0046933	EnsemblPlantsGene:GSBRNA2T00103070001	HAMAP:MF_00815	PFAM:PF00231	PRINTS:PR00126	ScanProsite:PS00153
PANTHER:PTHR11693	PANTHER:PTHR11693:SF23	SUPFAM:SSF52943	TIGRFAMs:TIGR01146	UniParc:UPI0004EE6E95	SEG:seg

Description

BnaA08g23770D

Coordinates

chrLK031895:+:1138626..1139765

Molecular Weight (calculated)

41715.4 Da

IEP (calculated)

8.029

GRAVY (calculated)

-0.168

Length

379 amino acids

Sequence
(BLAST)

001: MTGSISTSWL LSSPTNSKPL STSKSITFLP TLNPRRSPDR FPSRSPSPSL QIRAGIRELR ERIDTVKNTQ KITEAMKLVA AARVRRAQEA VINCRPFTEA
101: LVGILHSINQ CAQLEDVDFP LSNVRPVKRV ALVVVTGDKG LCGGFNNAVI KKANSRVDEL KQRGIECVVV SVGKKGNAYF SRRDDVEVDK CIQGGGVYPT
201: AKEAQVIADD VFSLFVSEEV DKVELVYTKF VSLVKSDPVI HTLLPLAMKG ESCDVEGVCV DAMEDEMFRL TSKDGKLSVE RRKVEVERPE ISPLMQFEQD
301: PVQILDAMMP LYLNSQILRA LQESLASELA SRMSAMSNAT DNAVELKKSL TVAYNRERQA KITGELLEIV AGAEALRGT

Best Arabidopsis Sequence Match ( AT1G15700.1 )
(BLAST)

001: MTGSISTSWL LSSPSNSNSA SSSESYSFIA TLKPVRYYPF QSLTPNRISS RSPLPSIQIR AGIRELRERI DSVKNTQKIT EAMRLVAAAR VRRAQDAVIK
101: GRPFTETLVE ILYSINQSAQ LEDIDFPLSI VRPVKRVALV VVTGDKGLCG GFNNAVTKKA TLRVQELKQR GIDCVVISVG KKGNAYFSRR DEFDVDKCIE
201: GGGVFPTTKE AQVIADDVFS LFVSEEVDKV ELVYTKFVSL VKSDPVIHTL LPLSMKGESC DVKGECVDAI EDEMFRLTSK DGKLAVERTK LEVEKPEISP
301: LMQFEQDPVQ ILDAMMPLYL NSQILRALQE SLASELASRM NAMSNATDNA VELKKNLTMA YNRARQAKIT GELLEIVAGA EALRES

Arabidopsis Description

ATPC2ATP synthase gamma chain 2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q01909]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.