Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 4
- mitochondrion 7
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| Bra014069.1-P | |
| Bra032216.1-P |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT3G07480.1 | Bra014069.1-P | AT1G47260.1 | 21798944 |
| AT3G07480.1 | Bra032216.1-P | AT1G47260.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY35934 | Canola | mitochondrion | 100.0 | 100.0 |
| CDY28047 | Canola | mitochondrion | 98.7 | 96.82 |
| AT3G07480.1 | Thale cress | mitochondrion, plastid | 87.66 | 84.91 |
| Bra016480.1-P | Field mustard | cytosol | 27.92 | 71.67 |
| Solyc06g007630.1.1 | Tomato | plastid | 70.78 | 67.7 |
| PGSC0003DMT400053174 | Potato | mitochondrion | 70.78 | 67.7 |
| PGSC0003DMT400071190 | Potato | mitochondrion | 67.53 | 66.24 |
| KRH46572 | Soybean | mitochondrion | 65.58 | 63.92 |
| KRG99558 | Soybean | mitochondrion | 63.64 | 62.82 |
| VIT_07s0289g00020.t01 | Wine grape | mitochondrion | 63.64 | 60.12 |
| VIT_07s0141g00320.t01 | Wine grape | mitochondrion | 62.99 | 59.51 |
| Zm00001d006119_P001 | Maize | mitochondrion | 60.39 | 58.49 |
| Os09t0514600-00 | Rice | mitochondrion | 59.74 | 58.23 |
| GSMUA_Achr5P25690_001 | Banana | mitochondrion | 60.39 | 57.76 |
| EER99179 | Sorghum | mitochondrion | 59.09 | 57.23 |
| Zm00001d021141_P001 | Maize | mitochondrion | 59.09 | 55.15 |
| TraesCS5B01G298800.1 | Wheat | plastid | 56.49 | 54.38 |
| TraesCS5D01G306200.1 | Wheat | mitochondrion | 56.49 | 54.38 |
| HORVU5Hr1G078540.2 | Barley | mitochondrion | 56.49 | 53.37 |
| GSMUA_Achr11P... | Banana | mitochondrion | 60.39 | 40.09 |
Protein Annotations
| InterPro:2Fe-2S_ferredoxin-like_sf | Gene3D:3.10.20.30 | MapMan:35.2 | InterPro:Beta-grasp_dom_sf | EnsemblPlantsGene:Bra029651 | EnsemblPlants:Bra029651.1 |
| EnsemblPlants:Bra029651.1-P | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0006091 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009055 | GO:GO:0009987 | GO:GO:0022900 | GO:GO:0051536 | InterPro:IPR012675 |
| UniProt:M4ELI3 | PANTHER:PTHR23426 | PANTHER:PTHR23426:SF35 | SUPFAM:SSF54292 | UniParc:UPI0002547EE3 | SEG:seg |
Description
AT3G07480 (E=2e-066) | electron carrier/ iron-sulfur cluster binding
Coordinates
chrA05:-:22800275..22800739
Molecular Weight (calculated)
17103.7 Da
IEP (calculated)
8.495
GRAVY (calculated)
-0.301
Length
154 amino acids
Sequence
(BLAST)
(BLAST)
001: MATNLLKLSS QIRRLSPLTR SLTVRTSATS TGSKKVSDRI VKLSAIDADG DKKDIIGLSG QTLLRALTHT GLIDPLSHRL EDIDACSAEC EVQIAEEWLE
101: KLPPRTYDEE YVLKRNSRSR VLNKHSRLGC QVVLTQELQG MVVAVPEAKP WDIP
101: KLPPRTYDEE YVLKRNSRSR VLNKHSRLGC QVVLTQELQG MVVAVPEAKP WDIP
001: MATTLQKLSS QIHRLSPFTR SLIVRTSATS APSPSLGSKK VSDRIVKLSA IDPDGYKQDI IGLSGQTLLR ALTHTGLIDP ASHRLDDIEA CSAECEVQIA
101: EEWLEKLPPR TYDEEYVLKR SSRSRILNKH SRLGCQVVLT QELQGMVVAV PEAKPWDIP
101: EEWLEKLPPR TYDEEYVLKR SSRSRILNKH SRLGCQVVLT QELQGMVVAV PEAKPWDIP
Arabidopsis Description
2Fe-2S ferredoxin-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9SRR8]
SUBAcon: [mitochondrion,plastid]
SUBAcon: [mitochondrion,plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.