CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 4
mitochondrion 6
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d006119_P001	Maize	mitochondrion	96.86	96.86
Os09t0514600-00	Rice	mitochondrion	93.08	93.67
TraesCS5D01G306200.1	Wheat	mitochondrion	86.79	86.25
TraesCS5B01G298800.1	Wheat	plastid	86.79	86.25
HORVU5Hr1G078540.2	Barley	mitochondrion	83.02	80.98
GSMUA_Achr5P25690_001	Banana	mitochondrion	71.7	70.81
Solyc06g007630.1.1	Tomato	plastid	67.3	66.46
PGSC0003DMT400053174	Potato	mitochondrion	67.3	66.46
PGSC0003DMT400071190	Potato	mitochondrion	62.89	63.69
KRG99558	Soybean	mitochondrion	59.75	60.9
KRH46572	Soybean	mitochondrion	60.38	60.76
AT3G07480.1	Thale cress	mitochondrion, plastid	59.75	59.75
CDY35934	Canola	mitochondrion	57.23	59.09
Bra029651.1-P	Field mustard	mitochondrion	57.23	59.09
Bra016480.1-P	Field mustard	cytosol	22.01	58.33
CDY28047	Canola	mitochondrion	56.6	57.32
VIT_07s0289g00020.t01	Wine grape	mitochondrion	55.35	53.99
VIT_07s0141g00320.t01	Wine grape	mitochondrion	54.72	53.37
GSMUA_Achr11P...	Banana	mitochondrion	73.58	50.43
CDY43407	Canola	mitochondrion	23.27	50.0

Protein Annotations

InterPro:2Fe-2S_ferredoxin-like_sf	Gene3D:3.10.20.30	MapMan:35.2	EntrezGene:8059000	InterPro:Beta-grasp_dom_sf	UniProt:C5X5D7
EnsemblPlants:EER99179	ProteinID:EER99179	ProteinID:EER99179.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005739	GO:GO:0006091
GO:GO:0008150	GO:GO:0008152	GO:GO:0009055	GO:GO:0009507	GO:GO:0009536	GO:GO:0009719
GO:GO:0009735	GO:GO:0009987	GO:GO:0022900	GO:GO:0051536	InterPro:IPR012675	ProteinID:OQU89770.1
PANTHER:PTHR23426	PANTHER:PTHR23426:SF35	EnsemblPlantsGene:SORBI_3002G263100	SUPFAM:SSF54292	unigene:Sbi.4060	UniParc:UPI0001A83C7C
RefSeq:XP_002462658.1	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr2:-:64804254..64807107

Molecular Weight (calculated)

17161.8 Da

IEP (calculated)

7.975

GRAVY (calculated)

-0.001

Length

159 amino acids

Sequence
(BLAST)

001: MAIAARALRR LPLHLSPSIS RSFCAVSPAA APAPAAASAK VADRIVRVLA IDPDGARREV VGLTGQTLLR ALANAGLIEP ASHRLEEIDA CSAECEVHIA
101: QEWLDKLPPP SYEERYVLTR ASRNRELNKH ARLGCQVVLA PELQGMVVAV PEPKPWDIP

Best Arabidopsis Sequence Match ( AT3G07480.1 )
(BLAST)

001: MATTLQKLSS QIHRLSPFTR SLIVRTSATS APSPSLGSKK VSDRIVKLSA IDPDGYKQDI IGLSGQTLLR ALTHTGLIDP ASHRLDDIEA CSAECEVQIA
101: EEWLEKLPPR TYDEEYVLKR SSRSRILNKH SRLGCQVVLT QELQGMVVAV PEAKPWDIP

Arabidopsis Description

2Fe-2S ferredoxin-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9SRR8]
SUBAcon: [mitochondrion,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.