Factsheet for PGSC0003DMT400053174

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 3
mitochondrion 7

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc06g007630.1.1	Tomato	plastid	98.14	98.14
PGSC0003DMT400071190	Potato	mitochondrion	82.61	84.71
Bra029651.1-P	Field mustard	mitochondrion	67.7	70.78
CDY35934	Canola	mitochondrion	67.7	70.78
AT3G07480.1	Thale cress	mitochondrion, plastid	69.57	70.44
GSMUA_Achr5P25690_001	Banana	mitochondrion	69.57	69.57
CDY28047	Canola	mitochondrion	67.7	69.43
KRG99558	Soybean	mitochondrion	65.84	67.95
Zm00001d006119_P001	Maize	mitochondrion	67.08	67.92
KRH46572	Soybean	mitochondrion	66.46	67.72
EER99179	Sorghum	mitochondrion	66.46	67.3
Os09t0514600-00	Rice	mitochondrion	65.84	67.09
TraesCS5D01G306200.1	Wheat	mitochondrion	63.98	64.38
TraesCS5B01G298800.1	Wheat	plastid	63.98	64.38
Zm00001d021141_P001	Maize	mitochondrion	65.22	63.64
Bra016480.1-P	Field mustard	cytosol	23.6	63.33
HORVU5Hr1G078540.2	Barley	mitochondrion	63.35	62.58
VIT_07s0289g00020.t01	Wine grape	mitochondrion	63.35	62.58
VIT_07s0141g00320.t01	Wine grape	mitochondrion	62.73	61.96
CDY43407	Canola	mitochondrion	26.09	56.76
GSMUA_Achr11P...	Banana	mitochondrion	70.19	48.71

Protein Annotations

EntrezGene:102586026	InterPro:2Fe-2S_ferredoxin-like_sf	Gene3D:3.10.20.30	MapMan:35.2	InterPro:Beta-grasp_dom_sf	GO:GO:0003674
GO:GO:0003824	GO:GO:0005488	GO:GO:0006091	GO:GO:0008150	GO:GO:0008152	GO:GO:0009055
GO:GO:0009987	GO:GO:0022900	GO:GO:0051536	InterPro:IPR012675	UniProt:M1BUJ0	EnsemblPlantsGene:PGSC0003DMG400020639
PGSC:PGSC0003DMG400020639	EnsemblPlants:PGSC0003DMT400053174	PANTHER:PTHR23426	PANTHER:PTHR23426:SF35	SUPFAM:SSF54292	UniParc:UPI00029527F0
RefSeq:XP_006344097.1	SEG:seg	:	:	:	:

Description

Ferredoxin [Source:PGSC_GENE;Acc:PGSC0003DMG400020639]

Coordinates

chr6:-:2621784..2622661

Molecular Weight (calculated)

17513.9 Da

IEP (calculated)

8.864

GRAVY (calculated)

-0.263

Length

161 amino acids

Sequence
(BLAST)

001: MAIAYLRRFA SRIARNASLS SSFGSSIARS SASSSSPSAS AKVADRIVKL SAVDPDGNKR EVIGLSGQTL LKALTNQGLI DPDSHRLEDI DACSAECEVH
101: IAQEWLEKLP PASYDEKYVL KRNSRARVLN KHSRLGCQVV LSQELQGMVV ALPEPKPWDI P

Best Arabidopsis Sequence Match ( AT3G07480.1 )
(BLAST)

001: MATTLQKLSS QIHRLSPFTR SLIVRTSATS APSPSLGSKK VSDRIVKLSA IDPDGYKQDI IGLSGQTLLR ALTHTGLIDP ASHRLDDIEA CSAECEVQIA
101: EEWLEKLPPR TYDEEYVLKR SSRSRILNKH SRLGCQVVLT QELQGMVVAV PEAKPWDIP

Arabidopsis Description

2Fe-2S ferredoxin-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9SRR8]
SUBAcon: [mitochondrion,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.