Factsheet for GSMUA_Achr11P15040_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 3
mitochondrion 5
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr5P25690_001	Banana	mitochondrion	59.05	85.09
Os09t0514600-00	Rice	mitochondrion	51.29	75.32
EER99179	Sorghum	mitochondrion	50.43	73.58
Zm00001d006119_P001	Maize	mitochondrion	49.57	72.33
Zm00001d021141_P001	Maize	mitochondrion	50.43	70.91
Solyc06g007630.1.1	Tomato	plastid	48.71	70.19
PGSC0003DMT400053174	Potato	mitochondrion	48.71	70.19
TraesCS5D01G306200.1	Wheat	mitochondrion	48.28	70.0
TraesCS5B01G298800.1	Wheat	plastid	48.28	70.0
PGSC0003DMT400071190	Potato	mitochondrion	46.55	68.79
HORVU5Hr1G078540.2	Barley	mitochondrion	48.28	68.71
KRG99558	Soybean	mitochondrion	42.67	63.46
KRH46572	Soybean	mitochondrion	43.1	63.29
CDY35934	Canola	mitochondrion	40.09	60.39
Bra029651.1-P	Field mustard	mitochondrion	40.09	60.39
CDY28047	Canola	mitochondrion	40.52	59.87
VIT_07s0289g00020.t01	Wine grape	mitochondrion	41.81	59.51
AT3G07480.1	Thale cress	mitochondrion, plastid	40.52	59.12
VIT_07s0141g00320.t01	Wine grape	mitochondrion	41.38	58.9
Bra016480.1-P	Field mustard	cytosol	14.22	55.0
CDY43407	Canola	mitochondrion	16.38	51.35

Protein Annotations

InterPro:2Fe-2S_ferredoxin-like_sf	InterPro:2Fe-2S_ferredoxin-type	Gene3D:3.10.20.30	MapMan:35.2	InterPro:Beta-grasp_dom_sf	GO:GO:0003674
GO:GO:0003824	GO:GO:0005488	GO:GO:0006091	GO:GO:0008150	GO:GO:0008152	GO:GO:0009055
GO:GO:0009987	GO:GO:0022900	GO:GO:0051536	EnsemblPlantsGene:GSMUA_Achr11G15040_001	EnsemblPlants:GSMUA_Achr11P15040_001	EnsemblPlants:GSMUA_Achr11T15040_001
InterPro:IPR001041	InterPro:IPR012675	UniProt:M0RSD4	PANTHER:PTHR23426	PANTHER:PTHR23426:SF35	SUPFAM:SSF54292
UniParc:UPI000295D3DD	SEG:seg	:	:	:	:

Description

Putative Putidaredoxin [Source:GMGC_GENE;Acc:GSMUA_Achr11G15040_001]

Coordinates

chr11:+:16630435..16631133

Molecular Weight (calculated)

26089.7 Da

IEP (calculated)

10.870

GRAVY (calculated)

-0.249

Length

232 amino acids

Sequence
(BLAST)

001: MRTTISFHNK QVLWTWIARN RSVIGFRVVR TRPESDPLFP ITRRFRRSWI DLPPQPLRIS KSRETPAMAI AALRRIPVHL ARSDPFIYLR PLARPCSSSS
101: SAAIAPSSSV SKKVADRIVK LHAVDPEGSK REVVGLSGQT LLRALINAGL IDPASHRLEE IDACSAECEV HIAQQWLDKL PSASYDERYV LTRASRDRIL
201: NKHARLGCQV VLQPELQGMV VAVPEPKPWD TP

Best Arabidopsis Sequence Match ( AT3G07480.1 )
(BLAST)

001: MATTLQKLSS QIHRLSPFTR SLIVRTSATS APSPSLGSKK VSDRIVKLSA IDPDGYKQDI IGLSGQTLLR ALTHTGLIDP ASHRLDDIEA CSAECEVQIA
101: EEWLEKLPPR TYDEEYVLKR SSRSRILNKH SRLGCQVVLT QELQGMVVAV PEAKPWDIP

Arabidopsis Description

2Fe-2S ferredoxin-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9SRR8]
SUBAcon: [mitochondrion,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.