Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 1
- mitochondrion 3
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5D01G306200.1 | Wheat | mitochondrion | 93.25 | 95.0 |
| TraesCS5B01G298800.1 | Wheat | plastid | 93.25 | 95.0 |
| Zm00001d006119_P001 | Maize | mitochondrion | 80.98 | 83.02 |
| EER99179 | Sorghum | mitochondrion | 80.98 | 83.02 |
| Os09t0514600-00 | Rice | mitochondrion | 79.14 | 81.65 |
| Zm00001d021141_P001 | Maize | mitochondrion | 80.37 | 79.39 |
| GSMUA_Achr5P25690_001 | Banana | mitochondrion | 65.64 | 66.46 |
| PGSC0003DMT400053174 | Potato | mitochondrion | 62.58 | 63.35 |
| Solyc06g007630.1.1 | Tomato | plastid | 61.96 | 62.73 |
| PGSC0003DMT400071190 | Potato | mitochondrion | 57.67 | 59.87 |
| AT3G07480.1 | Thale cress | mitochondrion, plastid | 55.83 | 57.23 |
| Bra029651.1-P | Field mustard | mitochondrion | 53.37 | 56.49 |
| CDY35934 | Canola | mitochondrion | 53.37 | 56.49 |
| CDY28047 | Canola | mitochondrion | 53.99 | 56.05 |
| KRG99558 | Soybean | mitochondrion | 53.37 | 55.77 |
| KRH46572 | Soybean | mitochondrion | 53.37 | 55.06 |
| Bra016480.1-P | Field mustard | cytosol | 20.25 | 55.0 |
| CDY43407 | Canola | mitochondrion | 22.7 | 50.0 |
| VIT_07s0289g00020.t01 | Wine grape | mitochondrion | 49.69 | 49.69 |
| VIT_07s0141g00320.t01 | Wine grape | mitochondrion | 49.08 | 49.08 |
| GSMUA_Achr11P... | Banana | mitochondrion | 68.71 | 48.28 |
Protein Annotations
| InterPro:2Fe-2S_ferredoxin-like_sf | Gene3D:3.10.20.30 | MapMan:35.2 | UniProt:A0A287RXH7 | InterPro:Beta-grasp_dom_sf | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
| GO:GO:0005739 | GO:GO:0006091 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009055 | GO:GO:0009507 |
| GO:GO:0009536 | GO:GO:0009719 | GO:GO:0009735 | GO:GO:0009987 | GO:GO:0022900 | GO:GO:0051536 |
| EnsemblPlantsGene:HORVU5Hr1G078540 | EnsemblPlants:HORVU5Hr1G078540.2 | InterPro:IPR012675 | PANTHER:PTHR23426 | PANTHER:PTHR23426:SF35 | SUPFAM:SSF54292 |
| UniParc:UPI000B465FF1 | SEG:seg | : | : | : | : |
Description
No Description!
Coordinates
chrchr5H:-:555146295..555147063
Molecular Weight (calculated)
17528.3 Da
IEP (calculated)
8.350
GRAVY (calculated)
-0.044
Length
163 amino acids
Sequence
(BLAST)
(BLAST)
001: PTPNPTMAIA ARALRRLPLH LAPALARPFC AVSPAAAAPA PSAKVADRIV RVLAIDLDGG RREVGGLAGQ TLLRALVNAG LIEAASHRLD DIDACSAECE
101: VHIAQEWLEK MPAASYEERY VLTRASRNRE LNKHARLGCQ VVLGKEHQGM VVALPEPKPW DIP
101: VHIAQEWLEK MPAASYEERY VLTRASRNRE LNKHARLGCQ VVLGKEHQGM VVALPEPKPW DIP
001: MATTLQKLSS QIHRLSPFTR SLIVRTSATS APSPSLGSKK VSDRIVKLSA IDPDGYKQDI IGLSGQTLLR ALTHTGLIDP ASHRLDDIEA CSAECEVQIA
101: EEWLEKLPPR TYDEEYVLKR SSRSRILNKH SRLGCQVVLT QELQGMVVAV PEAKPWDIP
101: EEWLEKLPPR TYDEEYVLKR SSRSRILNKH SRLGCQVVLT QELQGMVVAV PEAKPWDIP
Arabidopsis Description
2Fe-2S ferredoxin-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9SRR8]
SUBAcon: [plastid,mitochondrion]
SUBAcon: [plastid,mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.