Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 1
- mitochondrion 6
- peroxisome 1
- cytosol 2
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| Bra000873.1-P | |
| Bra000895.1-P | |
| Bra001351.1-P | |
| Bra002403.1-P | |
| Bra003109.1-P | |
| Bra003171.1-P | |
| Bra003627.1-P | |
| Bra004437.1-P | |
| Bra004680.1-P | |
| Bra005924.1-P | |
| Bra005998.1-P | |
| Bra006117.1-P | |
| Bra006483.1-P | |
| Bra006619.1-P | |
| Bra007047.1-P | |
| Bra008938.1-P | |
| Bra009347.1-P | |
| Bra010452.1-P | |
| Bra011606.1-P | |
| Bra012661.1-P | |
| Bra012716.1-P | |
| Bra013908.1-P | |
| Bra013910.1-P | |
| Bra014069.1-P | |
| Bra016502.1-P | |
| Bra017426.1-P | |
| Bra018042.1-P | |
| Bra018100.1-P | |
| Bra018237.1-P | |
| Bra018576.1-P | |
| Bra020182.1-P | |
| Bra020934.1-P | |
| Bra021373.1-P | |
| Bra022613.1-P | |
| Bra023341.1-P | |
| Bra023359.1-P | |
| Bra023698.1-P | |
| Bra024437.1-P | |
| Bra024837.1-P | |
| Bra025750.1-P | |
| Bra026619.1-P | |
| Bra029106.1-P | |
| Bra029702.1-P | |
| Bra032017.1-P | |
| Bra032216.1-P | |
| Bra034766.1-P | |
| Bra035083.1-P | |
| Bra036294.1-P | |
| Bra036681.1-P | |
| Bra037836.1-P | |
| Bra037942.1-P | |
| Bra038466.1-P | |
| Bra040051.1-P |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT1G47260.1 | Bra018576.1-P | AT1G09180.1 | 21798944 |
| AT1G47260.1 | Bra016502.1-P | AT1G19580.1 | 15821992 |
| AT1G47260.1 | Bra025750.1-P | AT1G19580.1 | 15821992 |
| AT1G47260.1 | Bra014069.1-P | AT1G47260.1 | 15821992 |
| AT1G47260.1 | Bra032216.1-P | AT1G47260.1 | 15821992 |
| AT1G47260.1 | Bra014069.1-P | AT1G47260.1 | 19808034 |
| AT1G47260.1 | Bra032216.1-P | AT1G47260.1 | 19808034 |
| AT1G47260.1 | Bra003627.1-P | AT1G79010.1 | 12837548 |
| AT1G47260.1 | Bra035083.1-P | AT1G79010.1 | 12837548 |
| AT1G47260.1 | Bra017426.1-P | AT2G02050.1 | 12837548 |
| AT1G47260.1 | Bra024837.1-P | AT2G02050.1 | 12837548 |
| AT1G47260.1 | Bra026619.1-P | AT2G02050.1 | 12837548 |
| AT1G47260.1 | Bra036681.1-P | AT2G20360.1 | 12837548 |
| AT1G47260.1 | Bra018237.1-P | AT2G31490.1 | 12837548 |
| AT1G47260.1 | Bra004680.1-P | AT2G42310.1 | 12837548 |
| AT1G47260.1 | Bra004437.1-P | AT2G47690.1 | 12837548 |
| AT1G47260.1 | Bra021373.1-P | AT3G03100.1 | 12837548 |
| AT1G47260.1 | Bra032017.1-P | AT3G03100.1 | 12837548 |
| AT1G47260.1 | Bra001351.1-P | AT3G08610.1 | 12837548 |
| AT1G47260.1 | Bra029702.1-P | AT3G08610.1 | 12837548 |
| AT1G47260.1 | Bra040051.1-P | AT3G08610.1 | 12837548 |
| AT1G47260.1 | Bra034766.1-P | AT3G12260.1 | 12837548 |
| AT1G47260.1 | Bra018100.1-P | AT3G47930.1 | 12837548 |
| AT1G47260.1 | Bra018042.1-P | AT3G48680.1 | 12837548 |
| AT1G47260.1 | Bra018042.1-P | AT3G48680.1 | 15821992 |
| AT1G47260.1 | Bra018042.1-P | AT3G48680.1 | 21798944 |
| AT1G47260.1 | Bra003171.1-P | AT3G54120.1 | 21798944 |
| AT1G47260.1 | Bra007047.1-P | AT3G54120.1 | 21798944 |
| AT1G47260.1 | Bra000895.1-P | AT4G02080.1 | 21798944 |
| AT1G47260.1 | Bra036294.1-P | AT4G02080.1 | 21798944 |
| AT1G47260.1 | Bra000873.1-P | AT4G02580.1 | 12837548 |
| AT1G47260.1 | Bra012716.1-P | AT4G16450.1 | 12837548 |
| AT1G47260.1 | Bra038466.1-P | AT4G16450.1 | 12837548 |
| AT1G47260.1 | Bra012661.1-P | AT4G17486.1 | 21798944 |
| AT1G47260.1 | Bra020934.1-P | AT4G20150.1 | 12837548 |
| AT1G47260.1 | Bra010452.1-P | AT4G25660.1 | 21798944 |
| AT1G47260.1 | Bra013908.1-P | AT4G25660.1 | 21798944 |
| AT1G47260.1 | Bra013910.1-P | AT4G25660.1 | 21798944 |
| AT1G47260.1 | Bra010452.1-P | AT4G25680.1 | 21798944 |
| AT1G47260.1 | Bra013908.1-P | AT4G25680.1 | 21798944 |
| AT1G47260.1 | Bra013910.1-P | AT4G25680.1 | 21798944 |
| AT1G47260.1 | Bra011606.1-P | AT4G35320.1 | 15821992 |
| AT1G47260.1 | Bra005924.1-P | AT5G07110.1 | 21798944 |
| AT1G47260.1 | Bra005998.1-P | AT5G08530.1 | 12837548 |
| AT1G47260.1 | Bra009347.1-P | AT5G08530.1 | 12837548 |
| AT1G47260.1 | Bra006117.1-P | AT5G11770.1 | 12837548 |
| AT1G47260.1 | Bra008938.1-P | AT5G11770.1 | 12837548 |
| AT1G47260.1 | Bra023341.1-P | AT5G11770.1 | 12837548 |
| AT1G47260.1 | Bra023359.1-P | AT5G12010.1 | 21798944 |
| AT1G47260.1 | Bra006483.1-P | AT5G18910.1 | 21798944 |
| AT1G47260.1 | Bra023698.1-P | AT5G18910.1 | 21798944 |
| AT1G47260.1 | Bra002403.1-P | AT5G22290.1 | 21798944 |
| AT1G47260.1 | Bra006619.1-P | AT5G22290.1 | 21798944 |
| AT1G47260.1 | Bra020182.1-P | AT5G22290.1 | 21798944 |
| AT1G47260.1 | Bra037942.1-P | AT5G50100.1 | 21798944 |
| AT1G47260.1 | Bra003109.1-P | AT5G52840.1 | 12837548 |
| AT1G47260.1 | Bra022613.1-P | AT5G52840.1 | 12837548 |
| AT1G47260.1 | Bra029106.1-P | AT5G52840.1 | 12837548 |
| AT1G47260.1 | Bra024437.1-P | AT5G67590.1 | 12837548 |
| AT1G47260.1 | Bra037836.1-P | AT5G67590.1 | 12837548 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY23649 | Canola | mitochondrion | 100.0 | 99.64 |
| AT1G47260.1 | Thale cress | mitochondrion | 87.68 | 87.05 |
| Bra014069.1-P | Field mustard | mitochondrion | 75.0 | 86.97 |
| Bra016502.1-P | Field mustard | mitochondrion | 71.38 | 73.23 |
| Bra012077.1-P | Field mustard | mitochondrion | 57.97 | 63.24 |
| Bra025750.1-P | Field mustard | cytosol | 34.06 | 52.81 |
| Bra018042.1-P | Field mustard | mitochondrion | 19.2 | 20.7 |
| Bra029221.1-P | Field mustard | mitochondrion | 18.84 | 20.63 |
| Bra038640.1-P | Field mustard | mitochondrion | 18.84 | 20.63 |
| Bra035840.1-P | Field mustard | mitochondrion | 19.2 | 20.31 |
Protein Annotations
| EnsemblPlants:Bra032216.1 | EnsemblPlants:Bra032216.1-P | EnsemblPlantsGene:Bra032216 | Gene3D:2.160.10.10 | InterPro:Hexapep | InterPro:Trimer_LpxA-like_sf |
| PANTHER:PTHR13061 | PANTHER:PTHR13061:SF23 | PFAM:PF00132 | SUPFAM:SSF51161 | UniParc:UPI0002547D9B | UniProt:M4ETT4 |
| MapMan:2.4.1.4.6 | : | : | : | : | : |
Description
AT1G47260 (E=6e-141) APFI, GAMMA CA2 | GAMMA CA2 (GAMMA CARBONIC ANHYDRASE 2); carbonate dehydratase
Coordinates
chrA05:-:12812034..12813493
Molecular Weight (calculated)
29971.6 Da
IEP (calculated)
6.681
GRAVY (calculated)
-0.216
Length
276 amino acids
Sequence
(BLAST)
(BLAST)
001: MGTLGRAIYT VGKWIRGSGQ ALDRVGSLLQ GSHRFEEHLS RHRTLMNVFD KSPLVDKDVF VAPSASVLGD VQIGKGSSIW YGCVLRGDVN NISVGSGTNI
101: QDNSLVHVAK TNLGGKVSPT TIGDNVTVGH SAVIHGCTVE DDAFVGMGAT LLDGVVVETH AMVAAGSIVK ENTRIPSREV WGGNPAKFMR KLTDEEIAYI
201: SKSAENYINL AHIHAAENSK SFDEIEVERA LRKKYARKDE DYDSMLGIVR ETPAELILPD NVLPEKTTTR VPTTHY
101: QDNSLVHVAK TNLGGKVSPT TIGDNVTVGH SAVIHGCTVE DDAFVGMGAT LLDGVVVETH AMVAAGSIVK ENTRIPSREV WGGNPAKFMR KLTDEEIAYI
201: SKSAENYINL AHIHAAENSK SFDEIEVERA LRKKYARKDE DYDSMLGIVR ETPAELILPD NVLPEKTTTR VPTTHY
001: MGTLGRAIYT VGNWIRGTGQ ALDRVGSLLQ GSHRIEEHLS RHRTLMNVFD KSPLVDKDVF VAPSASVIGD VQIGKGSSIW YGCVLRGDVN NISVGSGTNI
101: QDNTLVHVAK TNISGKVLPT LIGDNVTVGH SAVIHGCTVE DDAFVGMGAT LLDGVVVEKH AMVAAGSLVK QNTRIPSGEV WGGNPAKFMR KLTDEEIVYI
201: SQSAKNYINL AQIHASENSK SFEQIEVERA LRKKYARKDE DYDSMLGITR ETPPELILPD NVLPGGKPVA KVPSTQYF
101: QDNTLVHVAK TNISGKVLPT LIGDNVTVGH SAVIHGCTVE DDAFVGMGAT LLDGVVVEKH AMVAAGSLVK QNTRIPSGEV WGGNPAKFMR KLTDEEIVYI
201: SQSAKNYINL AQIHASENSK SFEQIEVERA LRKKYARKDE DYDSMLGITR ETPPELILPD NVLPGGKPVA KVPSTQYF
Arabidopsis Description
GAMMACA2GAMMA CA2 [Source:UniProtKB/TrEMBL;Acc:A0A178WI45]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.