Factsheet for Bra035840.1-P

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
mitochondrion 9

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY16720	Canola	mitochondrion	86.97	90.08
Bra038640.1-P	Field mustard	mitochondrion	84.67	87.7
Bra029221.1-P	Field mustard	mitochondrion	83.91	86.9
Bra018042.1-P	Field mustard	mitochondrion	83.91	85.55
CDY66238	Canola	mitochondrion	86.59	81.88
KRH59820	Soybean	mitochondrion	73.18	75.49
AT5G63510.2	Thale cress	mitochondrion	80.46	75.27
KRH41125	Soybean	endoplasmic reticulum, mitochondrion	72.41	74.7
VIT_17s0000g01240.t01	Wine grape	mitochondrion	68.58	73.06
PGSC0003DMT400039315	Potato	mitochondrion	69.35	71.83
Solyc03g019720.2.1	Tomato	plastid	69.35	71.83
GSMUA_Achr2P06160_001	Banana	mitochondrion	69.35	71.54
GSMUA_Achr6P27510_001	Banana	mitochondrion	67.05	69.72
HORVU6Hr1G044700.2	Barley	mitochondrion	68.97	69.5
Os02t0508000-01	Rice	mitochondrion	68.58	69.38
TraesCS6A01G188800.2	Wheat	golgi	67.82	69.14
TraesCS6D01G177500.2	Wheat	mitochondrion	67.43	68.75
TraesCS6B01G215700.2	Wheat	mitochondrion	67.05	68.36
EES06863	Sorghum	mitochondrion	67.82	67.56
Zm00001d016566_P001	Maize	mitochondrion	66.67	58.78
Bra012077.1-P	Field mustard	mitochondrion	21.07	21.74
Bra016502.1-P	Field mustard	mitochondrion	21.07	20.45
Bra032216.1-P	Field mustard	mitochondrion	20.31	19.2
Bra014069.1-P	Field mustard	mitochondrion	14.94	16.39
Bra025750.1-P	Field mustard	cytosol	10.34	15.17

Protein Annotations

EnsemblPlants:Bra035840.1	EnsemblPlants:Bra035840.1-P	EnsemblPlantsGene:Bra035840	Gene3D:2.160.10.10	InterPro:Trimer_LpxA-like_sf	PANTHER:PTHR13061
PANTHER:PTHR13061:SF22	SEG:seg	SUPFAM:SSF51161	UniParc:UPI0002541A5D	UniProt:M4F440	MapMan:2.4.1.4.7

Description

AT3G48680 (E=4e-126) GAMMA CAL2 | GAMMA CAL2 (GAMMA CARBONIC ANHYDRASE-LIKE 2); transferase

Coordinates

chrA09:+:3347537..3349145

Molecular Weight (calculated)

28561.5 Da

IEP (calculated)

8.467

GRAVY (calculated)

0.057

Length

261 amino acids

Sequence
(BLAST)

001: MATSISRSSR RGVASTLIRR CFAAEAALAA RTEPPKPKLT VSPSPDRVKW DYRGQRQIIP LGQWLPKVAV DAYVAPNVVL AGQVTVWDGS SVWNGAVLRG
101: DLNKITLGFC SNVQERCVVH AAWSSPTGLP FIFEFTGLPA ETLIDRYVTV GAYSLLRSCT IEPECIIGQH SILMEGSLVE TRSILEAGSV VPPGRRIPSG
201: ELWGGNPARF IRTLTNEETL EIPKLAVAIN HLSGDYFSEF LPYSTVYLEV EKFKKSLGIT V

Best Arabidopsis Sequence Match ( AT5G63510.1 )
(BLAST)

001: MATSIARLSR RGVTSNLIRR CFAAEAALAR KTELPKPQFT VSPSTDRVKW DYRGQRQIIP LGQWLPKVAV DAYVAPNVVL AGQVTVWDGS SVWNGAVLRG
101: DLNKITVGFC SNVQERCVVH AAWSSPTGLP AATIIDRYVT VGAYSLLRSC TIEPECIIGQ HSILMEGSLV ETRSILEAGS VVPPGRRIPS GELWGGNPAR
201: FIRTLTNEET LEIPKLAVAI NHLSGDYFSE FLPYSTVYLE VEKFKKSLGI AV

Arabidopsis Description

GAMMA CAL1Gamma carbonic anhydrase like 1 [Source:UniProtKB/TrEMBL;Acc:F4KAQ8]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.