Factsheet for GSMUA_Achr6P27510_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
mitochondrion 9

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr2P06160_001	Banana	mitochondrion	82.87	82.21
VIT_17s0000g01240.t01	Wine grape	mitochondrion	71.71	73.47
PGSC0003DMT400039315	Potato	mitochondrion	73.71	73.41
Solyc03g019720.2.1	Tomato	plastid	73.71	73.41
Os02t0508000-01	Rice	mitochondrion	74.5	72.48
CDY16720	Canola	mitochondrion	72.11	71.83
EES06863	Sorghum	mitochondrion	74.9	71.76
KRH59820	Soybean	mitochondrion	71.71	71.15
KRH41125	Soybean	endoplasmic reticulum, mitochondrion	71.71	71.15
HORVU6Hr1G044700.2	Barley	mitochondrion	73.31	71.04
Bra038640.1-P	Field mustard	mitochondrion	71.31	71.03
TraesCS6A01G188800.2	Wheat	golgi	72.11	70.7
CDY68990	Canola	mitochondrion	70.92	70.63
CDX84424	Canola	mitochondrion	70.92	70.63
TraesCS6B01G215700.2	Wheat	mitochondrion	71.71	70.31
CDY39864	Canola	mitochondrion	70.92	70.08
CDY05862	Canola	mitochondrion	70.52	69.96
TraesCS6D01G177500.2	Wheat	mitochondrion	71.31	69.92
CDY31369	Canola	mitochondrion	70.12	69.84
Bra029221.1-P	Field mustard	mitochondrion	70.12	69.84
Bra018042.1-P	Field mustard	mitochondrion	70.52	69.14
AT3G48680.1	Thale cress	mitochondrion	70.12	68.75
CDY08089	Canola	mitochondrion	70.12	68.75
Bra035840.1-P	Field mustard	mitochondrion	69.72	67.05
CDY66238	Canola	mitochondrion	71.31	64.86
AT5G63510.2	Thale cress	mitochondrion	70.52	63.44
Zm00001d016566_P001	Maize	mitochondrion	72.11	61.15
GSMUA_Achr5P07890_001	Banana	mitochondrion	14.74	28.46
GSMUA_Achr3P09240_001	Banana	mitochondrion	14.74	28.46
GSMUA_AchrUn_...	Banana	mitochondrion	14.34	27.69
GSMUA_Achr2P01940_001	Banana	cytosol	13.94	14.4
GSMUA_Achr3P09250_001	Banana	cytosol	6.37	10.46
GSMUA_AchrUn_...	Banana	extracellular, golgi	5.18	7.88
GSMUA_Achr5P07880_001	Banana	cytosol, mitochondrion, plastid	1.2	2.7

Protein Annotations

EnsemblPlants:GSMUA_Achr6P27510_001	EnsemblPlants:GSMUA_Achr6T27510_001	EnsemblPlantsGene:GSMUA_Achr6G27510_001	Gene3D:2.160.10.10	InterPro:Hexapep	InterPro:Trimer_LpxA-like_sf
PANTHER:PTHR13061	PANTHER:PTHR13061:SF22	PFAM:PF00132	SEG:seg	SUPFAM:SSF51161	UniParc:UPI0002961CDD
UniProt:M0TAP6	MapMan:2.4.1.4.7	:	:	:	:

Description

Uncharacterized protein At5g63510, mitochondrial [Source:GMGC_GENE;Acc:GSMUA_Achr6G27510_001]

Coordinates

chr6:+:28008281..28012983

Molecular Weight (calculated)

27289.1 Da

IEP (calculated)

8.216

GRAVY (calculated)

0.108

Length

251 amino acids

Sequence
(BLAST)

001: MAAALARLSR RTLADPSRLV PLRRLLSAEA AAPAVSPAAG PPLTPSDRVK WDYRGQRRII PLGQWVPNIA VDAYVAPNVV LAGQVTVCDG ASVWNGAVLR
101: GDLNKITVGF CSNVQERCVL HAAWKSPTGL PAETLVERYV TLGAYSLLRS CTIEPECIIG QHSILMEGSL VETNSILESG SVLPPGRRIP TGELWAGNPA
201: RFVRKLTHEE ILEIPKLAVA INDLMQSHFS EFLPYSTVYL EKPSHFTAFI S

Best Arabidopsis Sequence Match ( AT3G48680.1 )
(BLAST)

001: MATSLARISK RSITSAVSSN LIRRYFAAEA VAVATTETPK PKSQVTPSPD RVKWDYRGQR QIIPLGQWLP KVAVDAYVAP NVVLAGQVTV WDGSSVWNGA
101: VLRGDLNKIT VGFCSNVQER CVVHAAWSSP TGLPAQTLID RYVTVGAYSL LRSCTIEPEC IIGQHSILME GSLVETRSIL EAGSVLPPGR RIPSGELWGG
201: NPARFIRTLT NEETLEIPKL AVAINHLSGD YFSEFLPYST IYLEVEKFKK SLGIAI

Arabidopsis Description

GAMMACAL2Gamma carbonic anhydrase-like 2, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9SMN1]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.