Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 4
- mitochondrion 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
Predictors | GFP | MS/MS | Papers | ||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
GSMUA_Achr5P07880_001 | Banana | cytosol, mitochondrion, plastid | 67.97 | 93.69 |
GSMUA_AchrUn_... | Banana | extracellular, golgi | 80.39 | 74.55 |
KRH61144 | Soybean | cytosol | 73.86 | 51.83 |
VIT_18s0001g12730.t01 | Wine grape | cytosol | 84.31 | 47.43 |
KRH61146 | Soybean | cytosol | 80.39 | 44.57 |
KRH51833 | Soybean | mitochondrion | 79.08 | 44.32 |
AT1G19580.1 | Thale cress | mitochondrion | 77.12 | 42.91 |
Solyc04g080570.2.1 | Tomato | plastid | 75.16 | 42.12 |
GSMUA_Achr2P01940_001 | Banana | cytosol | 66.67 | 41.98 |
PGSC0003DMT400009474 | Potato | mitochondrion | 74.51 | 41.76 |
CDX83758 | Canola | mitochondrion, plastid | 66.67 | 37.92 |
CDX96658 | Canola | mitochondrion | 66.01 | 37.55 |
Bra016502.1-P | Field mustard | mitochondrion | 66.01 | 37.55 |
CDY29419 | Canola | cytosol | 35.95 | 29.89 |
Bra025750.1-P | Field mustard | cytosol | 32.68 | 28.09 |
CDY39368 | Canola | mitochondrion | 35.95 | 22.63 |
GSMUA_Achr2P06160_001 | Banana | mitochondrion | 11.11 | 6.72 |
GSMUA_Achr6P27510_001 | Banana | mitochondrion | 10.46 | 6.37 |
GSMUA_AchrUn_... | Banana | mitochondrion | 1.31 | 1.54 |
GSMUA_Achr5P07890_001 | Banana | mitochondrion | 1.31 | 1.54 |
GSMUA_Achr3P09240_001 | Banana | mitochondrion | 1.31 | 1.54 |
Protein Annotations
EnsemblPlants:GSMUA_Achr3P09250_001 | EnsemblPlants:GSMUA_Achr3T09250_001 | EnsemblPlantsGene:GSMUA_Achr3G09250_001 | Gene3D:2.160.10.10 | InterPro:Hexapep | InterPro:Trimer_LpxA-like_sf |
PANTHER:PTHR13061 | PANTHER:PTHR13061:SF9 | PFAM:PF00132 | SUPFAM:SSF51161 | UniParc:UPI000296C931 | UniProt:M0SD42 |
MapMan:2.4.1.4.6 | : | : | : | : | : |
Description
bacterial transferase hexapeptide domain containing protein, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr3G09250_001]
Coordinates
chr3:+:6660729..6662364
Molecular Weight (calculated)
16877.3 Da
IEP (calculated)
5.260
GRAVY (calculated)
-0.171
Length
153 amino acids
Sequence
(BLAST)
(BLAST)
001: MLLNIQFGHN AVLHGCTVED ETFVGMGSVL LDGVVVEKHG MVAAGALVRQ NTRIPCGEVW GGNPAKFLRK LTDEEIAFIS QSATNYANLA QVHAAENAKS
101: FDEIEFEKVL RKKFARRDEE YDSMLGVVRE VPQELILPDN ILPNKSPKPS QIG
101: FDEIEFEKVL RKKFARRDEE YDSMLGVVRE VPQELILPDN ILPNKSPKPS QIG
001: MGTLGRAFYS VGFWIRETGQ ALDRLGCRLQ GKNYFREQLS RHRTLMNVFD KAPIVDKEAF VAPSASVIGD VHIGRGSSIW YGCVLRGDVN TVSVGSGTNI
101: QDNSLVHVAK SNLSGKVHPT IIGDNVTIGH SAVLHGCTVE DETFIGMGAT LLDGVVVEKH GMVAAGALVR QNTRIPSGEV WGGNPARFLR KLTDEEIAFI
201: SQSATNYSNL AQAHAAENAK PLNVIEFEKV LRKKHALKDE EYDSMLGIVR ETPPELNLPN NILPDKETKR PSNVN
101: QDNSLVHVAK SNLSGKVHPT IIGDNVTIGH SAVLHGCTVE DETFIGMGAT LLDGVVVEKH GMVAAGALVR QNTRIPSGEV WGGNPARFLR KLTDEEIAFI
201: SQSATNYSNL AQAHAAENAK PLNVIEFEKV LRKKHALKDE EYDSMLGIVR ETPPELNLPN NILPDKETKR PSNVN
Arabidopsis Description
GAMMACA1GAMMA CA1 [Source:UniProtKB/TrEMBL;Acc:A0A178WHZ1]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.