Subcellular Localization
min:
: max
Winner_takes_all: golgi, extracellular
Predictor Summary:
Predictor Summary:
- extracellular 5
- endoplasmic reticulum 4
- vacuole 4
- plasma membrane 4
- golgi 5
- nucleus 1
- mitochondrion 2
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr5P07880_001 | Banana | cytosol, mitochondrion, plastid | 56.97 | 84.68 |
| GSMUA_Achr3P09250_001 | Banana | cytosol | 74.55 | 80.39 |
| Os07t0642900-01 | Rice | nucleus | 70.3 | 42.49 |
| Os12t0169700-01 | Rice | mitochondrion | 70.3 | 42.49 |
| EER99796 | Sorghum | mitochondrion | 69.7 | 42.12 |
| TraesCS2A01G144200.1 | Wheat | mitochondrion | 69.7 | 41.97 |
| TraesCS2D01G148200.1 | Wheat | mitochondrion | 69.7 | 41.97 |
| Zm00001d022324_P001 | Maize | mitochondrion | 69.09 | 41.76 |
| GSMUA_Achr2P01940_001 | Banana | cytosol | 61.21 | 41.56 |
| TraesCS2B01G169200.1 | Wheat | golgi | 67.27 | 40.51 |
| HORVU2Hr1G025530.2 | Barley | plastid | 65.45 | 35.29 |
| GSMUA_Achr2P06160_001 | Banana | mitochondrion | 9.09 | 5.93 |
| GSMUA_Achr6P27510_001 | Banana | mitochondrion | 7.88 | 5.18 |
| GSMUA_Achr3P09240_001 | Banana | mitochondrion | 3.64 | 4.62 |
| GSMUA_Achr5P07890_001 | Banana | mitochondrion | 3.64 | 4.62 |
| GSMUA_AchrUn_... | Banana | mitochondrion | 3.64 | 4.62 |
Protein Annotations
| EnsemblPlants:GSMUA_AchrUn_randomP14110_001 | EnsemblPlants:GSMUA_AchrUn_randomT14110_001 | EnsemblPlantsGene:GSMUA_AchrUn_randomG14110_001 | Gene3D:2.160.10.10 | InterPro:Hexapep | InterPro:Trimer_LpxA-like_sf |
| PANTHER:PTHR13061 | PANTHER:PTHR13061:SF9 | PFAM:PF00132 | SignalP:SignalP-noTM | SUPFAM:SSF51161 | UniParc:UPI000294CFDE |
| UniProt:M0U920 | MapMan:2.4.1.4.6 | : | : | : | : |
Description
bacterial transferase hexapeptide domain containing protein, expressed [Source:GMGC_GENE;Acc:GSMUA_AchrUn_randomG14110_001]
Coordinates
chrchrUn_random:+:66058981..66060523
Molecular Weight (calculated)
18364.2 Da
IEP (calculated)
6.238
GRAVY (calculated)
-0.061
Length
165 amino acids
Sequence
(BLAST)
(BLAST)
001: MNSTIYLKIR LLSRYFILGL SCHSVVLHGC TVEDEAFVGM GAVLLDGVVV EKHGMVAAGA LVRQNTRIPC GEVWGGNPAR FLRKLTEEEV AFISQSATNY
101: TNLAQVHAVE NAKSFDEIEF EKVLHKKFAR RDEEYDSMLG VVREVPPELI LPDNVLPDKS PKPSH
101: TNLAQVHAVE NAKSFDEIEF EKVLHKKFAR RDEEYDSMLG VVREVPPELI LPDNVLPDKS PKPSH
001: MGTLGRAFYS VGFWIRETGQ ALDRLGCRLQ GKNYFREQLS RHRTLMNVFD KAPIVDKEAF VAPSASVIGD VHIGRGSSIW YGCVLRGDVN TVSVGSGTNI
101: QDNSLVHVAK SNLSGKVHPT IIGDNVTIGH SAVLHGCTVE DETFIGMGAT LLDGVVVEKH GMVAAGALVR QNTRIPSGEV WGGNPARFLR KLTDEEIAFI
201: SQSATNYSNL AQAHAAENAK PLNVIEFEKV LRKKHALKDE EYDSMLGIVR ETPPELNLPN NILPDKETKR PSNVN
101: QDNSLVHVAK SNLSGKVHPT IIGDNVTIGH SAVLHGCTVE DETFIGMGAT LLDGVVVEKH GMVAAGALVR QNTRIPSGEV WGGNPARFLR KLTDEEIAFI
201: SQSATNYSNL AQAHAAENAK PLNVIEFEKV LRKKHALKDE EYDSMLGIVR ETPPELNLPN NILPDKETKR PSNVN
Arabidopsis Description
GAMMACA1GAMMA CA1 [Source:UniProtKB/TrEMBL;Acc:A0A178WHZ1]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.