CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 9
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d022324_P001	Maize	mitochondrion	97.8	97.8
Os12t0169700-01	Rice	mitochondrion	93.77	93.77
Os07t0642900-01	Rice	nucleus	90.84	90.84
TraesCS2D01G148200.1	Wheat	mitochondrion	89.01	88.69
TraesCS2A01G144200.1	Wheat	mitochondrion	89.01	88.69
TraesCS2B01G169200.1	Wheat	golgi	88.64	88.32
KRH61146	Soybean	cytosol	79.49	78.62
KRH51833	Soybean	mitochondrion	78.39	78.39
GSMUA_Achr5P07880_001	Banana	cytosol, mitochondrion, plastid	31.14	76.58
PGSC0003DMT400009474	Potato	mitochondrion	76.56	76.56
VIT_18s0001g12730.t01	Wine grape	cytosol	76.19	76.47
Solyc04g080570.2.1	Tomato	plastid	76.19	76.19
GSMUA_Achr5P07890_001	Banana	mitochondrion	36.26	76.15
PGSC0003DMT400040041	Potato	cytosol, mitochondrion	72.89	74.25
Solyc02g062600.2.1	Tomato	extracellular, nucleus	72.89	74.25
KRH61144	Soybean	cytosol	58.61	73.39
HORVU2Hr1G025530.2	Barley	plastid	81.32	72.55
AT1G19580.1	Thale cress	mitochondrion	72.53	72.0
EES00597	Sorghum	mitochondrion	68.5	71.1
GSMUA_AchrUn_...	Banana	extracellular, golgi	42.12	69.7
PGSC0003DMT400009047	Potato	mitochondrion	68.86	69.63
Solyc02g085040.2.1	Tomato	extracellular	68.86	69.63
Bra016502.1-P	Field mustard	mitochondrion	68.5	69.52
CDX83758	Canola	mitochondrion, plastid	68.5	69.52
CDX96658	Canola	mitochondrion	68.5	69.52
KRH76755	Soybean	mitochondrion	68.5	69.26
KRH28712	Soybean	mitochondrion	67.77	68.52
VIT_04s0023g02060.t01	Wine grape	cytosol	56.78	67.98
CDY50984	Canola	mitochondrion	59.34	62.31
AT5G66510.2	Thale cress	mitochondrion	60.81	61.71
Bra012077.1-P	Field mustard	mitochondrion	57.14	61.66
GSMUA_Achr2P01940_001	Banana	cytosol	54.58	61.32
CDY45234	Canola	mitochondrion	56.78	61.26
CDY55089	Canola	mitochondrion	57.88	61.24
CDY30772	Canola	mitochondrion	56.78	60.31
CDY59959	Canola	mitochondrion	14.29	54.93
CDY29419	Canola	cytosol	33.7	50.0
Bra025750.1-P	Field mustard	cytosol	32.23	49.44
CDY39368	Canola	mitochondrion	35.16	39.51
EES06863	Sorghum	mitochondrion	19.41	20.23

Protein Annotations

Gene3D:2.160.10.10	MapMan:2.4.1.4.6	EntrezGene:8073100	UniProt:C5X3Z0	EnsemblPlants:EER99796	ProteinID:EER99796
ProteinID:EER99796.1	GO:GO:0000003	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005739	GO:GO:0005747	GO:GO:0006950
GO:GO:0007275	GO:GO:0008150	GO:GO:0008152	GO:GO:0009507	GO:GO:0009536	GO:GO:0009628
GO:GO:0009651	GO:GO:0009791	GO:GO:0009901	GO:GO:0009908	GO:GO:0009987	GO:GO:0016020
GO:GO:0016043	GO:GO:0031966	GO:GO:0042802	GO:GO:0045271	GO:GO:0070207	GO:GO:2000377
InterPro:Hexapep	PFAM:PF00132	PANTHER:PTHR13061	PANTHER:PTHR13061:SF23	EnsemblPlantsGene:SORBI_3002G395000	SUPFAM:SSF51161
unigene:Sbi.4588	InterPro:Trimer_LpxA-like_sf	UniParc:UPI0001A83EB1	RefSeq:XP_002463275.1	:	:

Description

hypothetical protein

Coordinates

chr2:-:74753194..74756903

Molecular Weight (calculated)

29650.7 Da

IEP (calculated)

6.924

GRAVY (calculated)

-0.076

Length

273 amino acids

Sequence
(BLAST)

001: MGTLGRAIFT VGKWIRGTGQ AMDRLGSTLQ GGLRVEEQVS RHRTIMNIFE KEPKIHRDVF VAPSAAVIGD VEIGHGSSIW YGSILRGDVN SIHIGSGTNI
101: QDNSLVHVAK ANFSGKVLPT IIGSNVTVGH SAVLHACTIE DEAFVGMGAT LLDGVLVEKH SMVGAGSLVK QNTRIPSGEV WVGNPAKFLR KLTEEEIAFI
201: AQSATNYINL AQVHAAENAK SFDEIELEKM LRKKYAHKDE EYDSMLGVVR EIPPELILPD NILPHNAQKA VAR

Best Arabidopsis Sequence Match ( AT1G47260.1 )
(BLAST)

001: MGTLGRAIYT VGNWIRGTGQ ALDRVGSLLQ GSHRIEEHLS RHRTLMNVFD KSPLVDKDVF VAPSASVIGD VQIGKGSSIW YGCVLRGDVN NISVGSGTNI
101: QDNTLVHVAK TNISGKVLPT LIGDNVTVGH SAVIHGCTVE DDAFVGMGAT LLDGVVVEKH AMVAAGSLVK QNTRIPSGEV WGGNPAKFMR KLTDEEIVYI
201: SQSAKNYINL AQIHASENSK SFEQIEVERA LRKKYARKDE DYDSMLGITR ETPPELILPD NVLPGGKPVA KVPSTQYF

Arabidopsis Description

GAMMACA2GAMMA CA2 [Source:UniProtKB/TrEMBL;Acc:A0A178WI45]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.