Skip to main content
crop-pal logo
Soybean
Search for another protein from :
Soybean
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion

Predictor Summary:
  • cytosol 2
  • mitochondrion 7
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:mitochondrion
Any Predictor:cytosol, mitochondrion, plastid
BaCelLo:cytosol
EpiLoc:mitochondrion
iPSORT:mitochondrion
MultiLoc:mitochondrion
Plant-mPloc:cytosol
Predotar:mitochondrion
PProwler:mitochondrion
TargetP:mitochondrion
WoLF PSORT:plastid
YLoc:mitochondrion
 nucleus: 21132161
mitochondrion: 21766870
endoplasmic reticulum: 27224218
mitochondrion: 27780359
endoplasmic reticulum: 28499913
mitochondrion: 28499913
msms PMID: 21132161 doi
B Cooper, KB Campbell, J Feng, WM Garrett, R Frederick
Soybean Genomics and Improvement Laboratory, USDA-ARS, Beltsville, MD 20705, USA. bret.cooper@ars.usda.gov
msms PMID: 27780359 doi
G Mustafa, S Komatsu
Graduate School of Life and Environmental Science, University of Tsukuba , Tsukuba 305-8572, Japan., National Institute of Crop Science, National Agriculture and Food Research Organization , Tsukuba 305-8518, Japan.
msms PMID: 21766870 doi
S Komatsu, A Yamamoto, T Nakamura, MZ Nouri, Y Nanjo, K Nishizawa, K Furukawa
National Institute of Crop Science, Tsukuba 305-8518, Japan. skomatsu@affrc.go.jp
msms PMID: 28499913 doi
S Komatsu, X Wang, X Yin, Y Nanjo, H Ohyanagi, K Sakata
Department of Life Science and Informatics, Maebashi Institute of Technology, Maebashi 371-0816, Japan. Electronic address: ksakata@maebashi-it.ac.jp., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan; Faculty of Life and Environmental Sciences, University of Tsukuba, Tsukuba 305-8572, Japan., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan; Faculty of Life and Environmental Sciences, University of Tsukuba, Tsukuba 305-8572, Japan. Electronic address: komatsu.setsuko.fu@u.tsukuba.ac.jp., King Abdullah University of Science and Technology (KAUST), Computational Bioscience Research Center (CBRC), Thuwal 23955-6900, Saudi Arabia.
msms PMID: 27224218 doi
X Wang, S Komatsu
Graduate School of Life and Environmental Sciences, University of Tsukuba , Tsukuba 305-8572, Japan., National Institute of Crop Science, National Agriculture and Food Research Organization , Tsukuba 305-8518, Japan.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KRH61146 Soybean cytosol 93.41 92.39
KRH61144 Soybean cytosol 69.96 87.61
VIT_18s0001g12730.t01 Wine grape cytosol 83.52 83.82
GSMUA_Achr3P09240_001 Banana mitochondrion 39.19 82.31
GSMUA_AchrUn_... Banana mitochondrion 38.1 80.0
Solyc04g080570.2.1 Tomato plastid 79.49 79.49
Os12t0169700-01 Rice mitochondrion 79.49 79.49
TraesCS2B01G169200.1 Wheat golgi 79.49 79.2
PGSC0003DMT400009474 Potato mitochondrion 79.12 79.12
GSMUA_Achr3P09250_001 Banana cytosol 44.32 79.08
EER99796 Sorghum mitochondrion 78.39 78.39
AT1G19580.1 Thale cress mitochondrion 78.75 78.18
TraesCS2D01G148200.1 Wheat mitochondrion 78.39 78.1
TraesCS2A01G144200.1 Wheat mitochondrion 78.39 78.1
Zm00001d022324_P001 Maize mitochondrion 77.66 77.66
Os07t0642900-01 Rice nucleus 75.82 75.82
KRH76755 Soybean mitochondrion 74.73 75.56
Bra016502.1-P Field mustard mitochondrion 74.36 75.46
CDX83758 Canola mitochondrion, plastid 74.36 75.46
CDX96658 Canola mitochondrion 74.36 75.46
KRH28712 Soybean mitochondrion 73.99 74.81
EES00597 Sorghum mitochondrion 71.43 74.14
TraesCS3D01G199500.1 Wheat cytosol 70.33 73.28
HORVU7Hr1G022550.1 Barley cytosol 70.33 73.0
TraesCS3B01G224000.1 Wheat mitochondrion 69.6 72.52
TraesCS3A01G193500.1 Wheat cytosol 69.6 72.52
TraesCS7D01G101600.1 Wheat cytosol 69.6 72.52
TraesCS7A01G107200.1 Wheat cytosol 69.23 72.14
Zm00001d040515_P001 Maize mitochondrion 68.86 71.76
TraesCS7B01G005800.1 Wheat cytosol 68.86 71.76
Os01t0283100-01 Rice mitochondrion 68.86 71.48
HORVU3Hr1G045700.1 Barley cytosol 45.42 71.26
HORVU3Hr1G045750.1 Barley cytosol 45.42 71.26
Zm00001d008215_P002 Maize mitochondrion 69.96 69.45
HORVU2Hr1G025530.2 Barley plastid 73.26 65.36
HORVU3Hr1G045680.1 Barley cytosol, plastid 66.67 56.0
CDY29419 Canola cytosol 35.16 52.17
Bra025750.1-P Field mustard cytosol 33.7 51.69
HORVU6Hr1G050700.1 Barley cytosol, mitochondrion 6.59 51.43
CDY39368 Canola mitochondrion 37.0 41.56
KRH59820 Soybean mitochondrion 19.05 20.55
KRH41125 Soybean endoplasmic reticulum, mitochondrion 18.32 19.76
Protein Annotations
EMBL:ACUP02003394EMBL:BT098290EnsemblPlants:KRH51833EnsemblPlantsGene:GLYMA_06G030700EntrezGene:100805278Gene3D:2.160.10.10
InterPro:HexapepInterPro:Trimer_LpxA-like_sfPANTHER:PTHR13061PANTHER:PTHR13061:SF23PFAM:PF00132PFAM:PF14602
ProteinID:KRH51833ProteinID:KRH51833.1SUPFAM:SSF51161UniParc:UPI0001B16D9BUniProt:C6TKS1MapMan:2.4.1.4.6
Description
hypothetical protein
Coordinates
chr6:-:2416985..2420772
Molecular Weight (calculated)
29609.4 Da
IEP (calculated)
6.046
GRAVY (calculated)
-0.103
Length
273 amino acids
Sequence
(BLAST)
001: MGTLGRAIYS VGNWIRGTGQ AIDRLGSLLQ GGYYVQEQLS RHRTLMDIFD KAPVVDEDVF VAPSASVIGD VQLGRGSSIW YGVVLRGDVN SIRVGTGTNI
101: QDNSLVHVAK SNLSGKVLPT IIGNNVTVGH SAVIHGCTVE DEAFVGMGAI LLDGVVVEKN AMVAAGALVR QNTRIPSGEV WAGNPAKFLR KLTDEEIAFI
201: SQSATNYTNL AQVHASENSK SYDEIEFEKV LRKKYARKDE EYDSMLGVVR EIPPELILPD NVLPDKAEKA LKK
Best Arabidopsis Sequence Match ( AT1G47260.1 )
(BLAST)
001: MGTLGRAIYT VGNWIRGTGQ ALDRVGSLLQ GSHRIEEHLS RHRTLMNVFD KSPLVDKDVF VAPSASVIGD VQIGKGSSIW YGCVLRGDVN NISVGSGTNI
101: QDNTLVHVAK TNISGKVLPT LIGDNVTVGH SAVIHGCTVE DDAFVGMGAT LLDGVVVEKH AMVAAGSLVK QNTRIPSGEV WGGNPAKFMR KLTDEEIVYI
201: SQSAKNYINL AQIHASENSK SFEQIEVERA LRKKYARKDE DYDSMLGITR ETPPELILPD NVLPGGKPVA KVPSTQYF
Arabidopsis Description
GAMMACA2GAMMA CA2 [Source:UniProtKB/TrEMBL;Acc:A0A178WI45]
SUBAcon: [mitochondrion]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.