Factsheet for HORVU3Hr1G045680.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

plastid 4
cytosol 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, plastid
Any Predictor:	cytosol, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	cytosol
Predotar:	plastid
TargetP:	plastid
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU3Hr1G045700.1	Barley	cytosol	51.69	96.55
HORVU3Hr1G045750.1	Barley	cytosol	51.38	95.98
TraesCS3A01G193500.1	Wheat	cytosol	72.62	90.08
TraesCS3D01G199500.1	Wheat	cytosol	72.31	89.69
TraesCS3B01G224000.1	Wheat	mitochondrion	72.31	89.69
HORVU7Hr1G022550.1	Barley	cytosol	71.08	87.83
EES00597	Sorghum	mitochondrion	65.54	80.99
Os01t0283100-01	Rice	mitochondrion	64.92	80.23
HORVU6Hr1G050700.1	Barley	cytosol, mitochondrion	8.62	80.0
Zm00001d040515_P001	Maize	mitochondrion	63.38	78.63
Zm00001d008215_P002	Maize	mitochondrion	63.38	74.91
VIT_18s0001g12730.t01	Wine grape	cytosol	62.46	74.63
PGSC0003DMT400040041	Potato	cytosol, mitochondrion	60.0	72.76
AT1G19580.1	Thale cress	mitochondrion	61.54	72.73
Solyc02g062600.2.1	Tomato	extracellular, nucleus	59.38	72.01
Bra016502.1-P	Field mustard	mitochondrion	59.08	71.38
CDX96658	Canola	mitochondrion	59.08	71.38
CDX83758	Canola	mitochondrion, plastid	58.77	71.0
KRH76755	Soybean	mitochondrion	58.77	70.74
KRH28712	Soybean	mitochondrion	58.46	70.37
PGSC0003DMT400009047	Potato	mitochondrion	57.23	68.89
Solyc02g085040.2.1	Tomato	extracellular	57.23	68.89
KRH61146	Soybean	cytosol	58.15	68.48
KRH61144	Soybean	cytosol	45.23	67.43
CDY45234	Canola	mitochondrion	52.31	67.19
KRH51833	Soybean	mitochondrion	56.0	66.67
Bra012077.1-P	Field mustard	mitochondrion	51.69	66.4
AT5G66510.2	Thale cress	mitochondrion	53.54	64.68
CDY30772	Canola	mitochondrion	51.08	64.59
VIT_04s0023g02060.t01	Wine grape	cytosol	45.23	64.47
Solyc04g080570.2.1	Tomato	plastid	53.85	64.1
CDY50984	Canola	mitochondrion	51.08	63.85
PGSC0003DMT400009474	Potato	mitochondrion	53.54	63.74
CDY55089	Canola	mitochondrion	50.15	63.18
HORVU2Hr1G025530.2	Barley	plastid	50.15	53.27
CDY29419	Canola	cytosol	30.15	53.26
Bra025750.1-P	Field mustard	cytosol	28.62	52.25
CDY59959	Canola	mitochondrion	10.46	47.89
CDY39368	Canola	mitochondrion	29.54	39.51
HORVU6Hr1G044700.2	Barley	mitochondrion	17.23	21.62

Protein Annotations

EnsemblPlants:HORVU3Hr1G045680.1	EnsemblPlantsGene:HORVU3Hr1G045680	Gene3D:2.160.10.10	InterPro:Hexapep	InterPro:Trimer_LpxA-like_sf	PANTHER:PTHR13061
PANTHER:PTHR13061:SF9	PFAM:PF00132	SEG:seg	SUPFAM:SSF51161	UniParc:UPI000B488B6A	UniProt:A0A287KXQ1
MapMan:2.4.1.4.6	:	:	:	:	:

Description

No Description!

Coordinates

chrchr3H:+:300213545..300519612

Molecular Weight (calculated)

35342.7 Da

IEP (calculated)

9.692

GRAVY (calculated)

-0.166

Length

325 amino acids

Sequence
(BLAST)

001: MANPHHPNPC ELSLIKLSFF KDLPRAKARS QQTQGHRRRS RRSAIGSAAV AVLRSGPPPP PREMTKAFYA VGLWIRETGQ ALDRLGCRLQ GNYFFHEQIS
101: RHRTLMNIFD KAPHVHKEAF VAPSASLIGD VEVGPGSSIW YGCVLRGDAN NVQVGSGTNI QDNSVVHVAK SNLSGKVFPT IIGDNVTVGH SAVLQGCTVE
201: DEAFVGMGAT LLDGVVVEKH GMVAAGALVR QNTRIPCGEV WGGNPAKFLR KLTDEEIGFI GESSANYSNL ARAHAVESAK PMEKIDFEKV LRKKFAHQVL
301: LSVTQEVPPE LPPPPVLLLP NKLFL

Best Arabidopsis Sequence Match ( AT1G19580.1 )
(BLAST)

001: MGTLGRAFYS VGFWIRETGQ ALDRLGCRLQ GKNYFREQLS RHRTLMNVFD KAPIVDKEAF VAPSASVIGD VHIGRGSSIW YGCVLRGDVN TVSVGSGTNI
101: QDNSLVHVAK SNLSGKVHPT IIGDNVTIGH SAVLHGCTVE DETFIGMGAT LLDGVVVEKH GMVAAGALVR QNTRIPSGEV WGGNPARFLR KLTDEEIAFI
201: SQSATNYSNL AQAHAAENAK PLNVIEFEKV LRKKHALKDE EYDSMLGIVR ETPPELNLPN NILPDKETKR PSNVN

Arabidopsis Description

GAMMACA1GAMMA CA1 [Source:UniProtKB/TrEMBL;Acc:A0A178WHZ1]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.