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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion

Predictor Summary:
  • plastid 2
  • mitochondrion 4
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:mitochondrion
Any Predictor:cytosol, mitochondrion, plastid
BaCelLo:plastid
iPSORT:mitochondrion
MultiLoc:cytosol
PProwler:mitochondrion
TargetP:mitochondrion
WoLF PSORT:plastid
YLoc:mitochondrion
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
HORVU6Hr1G050700.1 Barley cytosol, mitochondrion 19.72 40.0
CDY17034 Canola mitochondrion 80.28 20.65
CDY47592 Canola mitochondrion 78.87 20.29
CDY67628 Canola mitochondrion 74.65 19.2
CDY23649 Canola mitochondrion 74.65 19.13
TraesCS2B01G169200.1 Wheat golgi 60.56 15.69
TraesCS2A01G144200.1 Wheat mitochondrion 60.56 15.69
TraesCS2D01G148200.1 Wheat mitochondrion 60.56 15.69
Os12t0169700-01 Rice mitochondrion 57.75 15.02
CDX83758 Canola mitochondrion, plastid 56.34 14.87
CDX96658 Canola mitochondrion 56.34 14.87
Zm00001d022324_P001 Maize mitochondrion 54.93 14.29
EER99796 Sorghum mitochondrion 54.93 14.29
PGSC0003DMT400009047 Potato mitochondrion 53.52 14.07
Solyc02g085040.2.1 Tomato extracellular 53.52 14.07
CDY55089 Canola mitochondrion 50.7 13.95
Os07t0642900-01 Rice nucleus 53.52 13.92
CDY50984 Canola mitochondrion 50.7 13.85
PGSC0003DMT400040041 Potato cytosol, mitochondrion 52.11 13.81
Solyc02g062600.2.1 Tomato extracellular, nucleus 52.11 13.81
Os01t0283100-01 Rice mitochondrion 50.7 13.69
CDY30772 Canola mitochondrion 49.3 13.62
CDY45234 Canola mitochondrion 47.89 13.44
Zm00001d040515_P001 Maize mitochondrion 47.89 12.98
EES00597 Sorghum mitochondrion 47.89 12.93
TraesCS3A01G193500.1 Wheat cytosol 46.48 12.6
TraesCS3B01G224000.1 Wheat mitochondrion 46.48 12.6
TraesCS3D01G199500.1 Wheat cytosol 46.48 12.6
TraesCS7A01G107200.1 Wheat cytosol 46.48 12.6
TraesCS7D01G101600.1 Wheat cytosol 46.48 12.6
HORVU7Hr1G022550.1 Barley cytosol 46.48 12.55
Zm00001d008215_P002 Maize mitochondrion 47.89 12.36
TraesCS7B01G005800.1 Wheat cytosol 45.07 12.21
HORVU3Hr1G045680.1 Barley cytosol, plastid 47.89 10.46
HORVU2Hr1G025530.2 Barley plastid 39.44 9.15
CDY39368 Canola mitochondrion 23.94 7.0
CDY29419 Canola cytosol 14.08 5.43
HORVU3Hr1G045750.1 Barley cytosol 8.45 3.45
HORVU3Hr1G045700.1 Barley cytosol 8.45 3.45
CDY05862 Canola mitochondrion 11.27 3.16
CDY39864 Canola mitochondrion 11.27 3.15
CDY08089 Canola mitochondrion 11.27 3.12
CDY68990 Canola mitochondrion 9.86 2.78
CDY31369 Canola mitochondrion 9.86 2.78
CDX84424 Canola mitochondrion 9.86 2.78
CDY16720 Canola mitochondrion 8.45 2.38
CDY66238 Canola mitochondrion 8.45 2.17
Protein Annotations
EnsemblPlants:CDY59959EnsemblPlantsGene:GSBRNA2T00027934001PANTHER:PTHR13061PANTHER:PTHR13061:SF23ProteinID:CDY59959ProteinID:CDY59959.1
UniParc:UPI0004EE0A6BUniProt:A0A078J665MapMan:35.1:::
Description
BnaA03g58890DBnaA03g58890D protein [Source:UniProtKB/TrEMBL;Acc:A0A078J665]
Coordinates
chrLK033824:-:43120..43467
Molecular Weight (calculated)
8088.9 Da
IEP (calculated)
9.300
GRAVY (calculated)
0.017
Length
71 amino acids
Sequence
(BLAST)
1: MGTLGRVIYT VGNWICGSGQ ALDRVGSLLQ GSHRLEEHLS RHRTLMSVFD ILCYLRTNIY QLPFRLKAVE P
Best Arabidopsis Sequence Match ( AT1G47260.1 )
(BLAST)
001: MGTLGRAIYT VGNWIRGTGQ ALDRVGSLLQ GSHRIEEHLS RHRTLMNVFD KSPLVDKDVF VAPSASVIGD VQIGKGSSIW YGCVLRGDVN NISVGSGTNI
101: QDNTLVHVAK TNISGKVLPT LIGDNVTVGH SAVIHGCTVE DDAFVGMGAT LLDGVVVEKH AMVAAGSLVK QNTRIPSGEV WGGNPAKFMR KLTDEEIVYI
201: SQSAKNYINL AQIHASENSK SFEQIEVERA LRKKYARKDE DYDSMLGITR ETPPELILPD NVLPGGKPVA KVPSTQYF
Arabidopsis Description
GAMMACA2GAMMA CA2 [Source:UniProtKB/TrEMBL;Acc:A0A178WI45]
SUBAcon: [mitochondrion]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.